Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq7 113 1e-19 seq21 93.3 9e-14 >seq7 Length=2023280 Score = 113 bits (124), Expect = 1e-19 Identities = 297/451 (66%), Gaps = 2/451 (0%) Strand=Plus/Plus Query 243289 TTTGCTGAGCGTCTCGTCGCCTGGGTGTGCGTTGAAGGTATTCTGTTTTCCGGGAGTTTC 243348 |||||| | ||||| ||||| | | |||||||||||| | || ||||| ||| Sbjct 1768119 TTTGCTCAACGTCTTGTCGCATTCGCTGCCGTTGAAGGTATCTTTTTCTCCGGATCCTTC 1768178 Query 243349 TGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAG 243408 | | ||||| ||||| ||| ||| | ||| | || ||| | || ||||| Sbjct 1768179 GCCTCTATCTTCTGGCTCAAGAAGCGTGGTCTCATGGCCGGACTCACCTTTTCAAACGAA 1768238 Query 243409 TTCATCAGTCGCGACGAGGGCCTTCACCAACAGTTCGGTGAGCTTATGTATTCAAAGCTC 243468 ||||| || ||||| || || ||| | |||| || | | || | ||| Sbjct 1768239 CTCATCTCCCGTGACGAAGGTCTCCACACCGATTTCGCATGCCTCCTCTTCTCCCATCTC 1768298 Query 243469 CAGAACAAGCTA-CCATTCGAAACGGTCAAACAAATCATCACAGAAGCAGTTGAAAACGA 243527 || || | | ||| | || | ||| || | ||||||| || || || | || ||| Sbjct 1768299 AAGCACCGCCCATCCAAGC-AAGCTGTCCAAGACGTCATCACCGAGGCCGTCGCAATCGA 1768357 Query 243528 AAAGGAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACTCAT 243587 | |||||| | ||| ||| |||| || ||| | ||||||||||| ||||| Sbjct 1768358 GCAAGAATTCTTGACCGAGGCTCTTCCTTGTGCTCTTCTAGGCATGAACTCCACCCTCAT 1768417 Query 243588 GGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAAGT 243647 | ||||||||||||||||| || || || | ||||||| | || | || ||||| Sbjct 1768418 GAAGCAGTACATCGAATTCGTTGCTGATCGTCTCCTCATCGCTTTGGGCAACGACAAAGT 1768477 Query 243648 GTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAA 243707 ||||| || || || |||| ||| |||||| ||||| | || || ||||| Sbjct 1768478 CTACAAATCTGCCAATCCATTTGACTTCATGGAGAATATTTCCTTGGCCGGCAAGACTAA 1768537 Query 243708 CTTCTTCGAAAAGCGTGTCAGTGATTATCAA 243738 ||| ||||||||| | || ||||||| ||| Sbjct 1768538 CTTTTTCGAAAAGAGAGTTGGTGATTACCAA 1768568 >seq21 Length=772658 Score = 93.3 bits (102), Expect = 9e-14 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 334136 GTCGAGATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAG 334195 |||||||||||| || ||| | |||| || | || | |||||| || || | Sbjct 238188 GTCGAGATCGTGCTCAACGAACACAGTCTTAACCTCACTCTTCTTGGGGAAACCCTCGAC 238247 Query 334196 CTGACCGTTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCCGTTTGGCCCACACAG 334255 || |||| |||||| ||||| ||||| ||||| || | ||||| || || || || Sbjct 238248 TTGCTCGTTGTTAATAGCACGCATGAGAGTAGATTTTCCGGAACCGTTAGGACCGCAGAG 238307 Query 334256 ACCGTAGCGGTTTCCACGCTTCAGATTGAACCGCGTATTGTTCAGAAGAATTTTTCCACC 334315 ||| || || | |||||||| ||| || | || ||||| |||||||| || |||| Sbjct 238308 ACCATATCGTTGACCACGCTTGAGACGGAGATGGGTGTTGTTAAGAAGAATCTTGGCACC 238367 Query 334316 ATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 334354 |||||||| ||| ||| | || || |||||||| Sbjct 238368 ATATGCCAAGTTAAAGGTACAGTTGCAAAGGTCCTCACC 238406 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102874771659500