Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq4 196 6e-45 seq7 111 2e-19 >seq4 Length=2560074 Score = 196 bits (216), Expect = 6e-45 Identities = 1107/1741 (64%), Gaps = 49/1741 (3%) Strand=Plus/Plus Query 113603 TAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGACAACTTG 113662 |||||||| || ||||| | ||| ||||| || | |||||| || | | |||| Sbjct 939926 TAGTACATTCCGGTCTTCAAACCCAATTTCCAACCAGCAAAATGCATGGATGTAATCTTG 939985 Query 113663 GAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCA 113722 | ||| ||| | |||| | |||||| ||| |||||||||||||| ||| Sbjct 939986 CCCATTGTAGGATCCTTCATGTGAATGTTCATTGATTGAGATTGATCGATGAATGCACCA 940045 Query 113723 CGATCCGCCGCCATATCAATCACATCCTTCATCTTGA--TTTCCCACACAGTTCTGTAGA 113780 ||||| || ||||| | || || || ||| | || ||||||| ||||| |||| | Sbjct 940046 CGATCAGCAGCCATTTGAA-CA-ATTGTTCGTTGAGAGATTTCCCAAACAGTCTTGTAAA 940103 Query 113781 GGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGCCTTGACCA 113840 | ||| || ||| |||| |||| ||||||||| ||||| ||||| | | | Sbjct 940104 GAGCCTTGATGTCAGCTGGAATATTGGGGATATTTTGAATGGATCCACCATCAGCAATGA 940163 Query 113841 TGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAG--ATG 113898 | | | |||||||| | ||||||||||| || | || |||| | || ||| Sbjct 940164 TACGGTTCTTCATATTGTCAGACCAGAGACCCATATCGACAAGGTCCTTGAGAAGCCATG 940223 Query 113899 CTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGA-TAGATATTGGTCGTGT 113957 | | || || || || || || || || | ||| ||||| || | |||| Sbjct 940224 GGT--TAACGACTTGGAATTCTCCGGCAAGAACACGACG-AGAGTAGATGTTTGAAGTGT 940280 Query 113958 ATGGCTCAAAGCACTCATTGTTACCCAAGA-TTTGGGCGGTGGAGGCTGTGGGCATGGGT 114016 | ||||| || || || ||| | |||||| |||||| ||| || || ||||| ||| Sbjct 940281 AAGGCTCGAAACATTCGTTGA-AGCCAAGAATTTGGGATGTGCTAGCAGTAGGCATAGGT 940339 Query 114017 GCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAG 114076 || | || || ||| |||| || | || | | ||| || ||| | | |||||| Sbjct 940340 GCAACTAGGAGAGAGTTGCGGATTCCGTGTTGCTTGATGGATTGCTTCAAAGAGTCCCAA 940399 Query 114077 TCGTAGT--TGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGG 114134 || | | || | || | ||| ||||||||| | || || ||| | ||| Sbjct 940400 TCCCACAAATCAG-TAGGTGTAACCCC-CCACATATCGTATTGAAGTTCACCCTTAGAGA 940457 Query 114135 CTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCT 114194 |||| || || | | | || ||||||||||| ||| || | ||| | | Sbjct 940458 CTGGGGAGCCTTGATAGGTTTCGTATGGGCCAAGTTCCTTTGCGATCTCGACGGAAGAGG 940517 Query 114195 CGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGG 114254 | ||| ||||| || || ||||| ||||| | || | ||||| || || Sbjct 940518 TCAAGGCAGCGTGGTAGATGGTCTCGAAAATTTGTATGTTGAGGTGTTTGGCTTCTGGGG 940577 Query 114255 AATCAAACGCGAGTCGGC-ACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCA 114313 | ||||| | || || | || ||| |||| || |||||||| ||||||| | Sbjct 940578 AGTCAAATGGAAGACGAAGAGCCAAGAAAG-CATCAGCAAGACCTTGAACACCGACCGCG 940636 Query 114314 ATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC-ACGGGATAAAAATTCCTATC 114372 || || ||||| | | ||| ||||| || ||| | || ||||| | || | || Sbjct 940637 ATAGGTCGATGACGGAAATTGCTTTTTCGGGCC-TCTGCGACTGGATAGTAGTTGATGTC 940695 Query 114373 GATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATC 114432 |||| | |||| | ||| | ||||| | | || |||||||||| | |||| Sbjct 940696 AATAATCTTATTCAAGTTTCTAACAACAACTTGGACAACCTCGTGAAGCTTTTGGAAATC 940755 Query 114433 AAAACTGCGAGTCTC-TTCAT--TGACATACTTAGGAAGGGCGATTGACGCCAGATTACA 114489 | || | | ||| ||||| |||| | | || | ||||| || |||| ||||| Sbjct 940756 ATAAGTTCC---CTCATTCATGTTGACGAAAGTTGGTAAAGCGATGGAAGCCAAGTTACA 940812 Query 114490 CACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTT 114549 || |||||| ||| |||||| | |||||||| |||||||| || || Sbjct 940813 GCAAGCAACCTCATCTGGTGCAGAGTACTCGACGATTTCCGTGCACAAATTGGAGCTGCG 940872 Query 114550 AATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTA 114609 ||| || |||| ||||||||| || ||| |||| || |||||||||||||||||| | Sbjct 940873 AATAGTACCCAGGTTCTTTTGGTTGCTCTTCTTGTTGCATGCATCCTTGTAAAGCATGAA 940932 Query 114610 TGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCA 114668 || | || ||||| ||||| | || ||||| | | ||| | | | | || | | Sbjct 940933 AGGATTTCCGGTCTCGGTTTGAGCCTCAAGAATGGAGTACCAAAGTTTTTGAGCCTTG-A 940991 Query 114669 CAGTGGCGTTGGCTCGCCCCT------CCTCCTCGTACTTTGTGTAGAGGGCTTCAAACT 114722 ||| ||| || |||| ||| ||||| |||||| || || |||| Sbjct 940992 TAGT---CTTG---CGACCCTTGCCTGCCTTTTCGTAACCCTCGTAGAGAGCCTCGAACT 941045 Query 114723 CTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGAC 114782 | || || | |||| | ||||| | | ||||| | ||||| ||| | | Sbjct 941046 CCTCGCCATAAACATCTGCTAAACCTGGACATTCGTTGGGGCACATGAGAGTCCAATCTC 941105 Query 114783 CACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCC 114842 || || ||||||||||||||||| || || || ||||| | || |||||||||| | Sbjct 941106 CATTCTTTTCAACACGCTTCATGAATAGATCAGGAATCCACAAGGCGTAGAAGAGATCGC 941165 Query 114843 GACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCG 114902 | ||| ||||||| | || ||||| || | || | || || | | ||||| Sbjct 941166 GTGCACGAACTTCTTCCTTGCCATGATTTTTGCGTAGATCAAGGAACTCAAAAACATCCG 941225 Query 114903 CGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACGACCAGCCTGGTTTA 114959 | ||||| || || ||||| || || | | || ||| | |||| | || | | Sbjct 941226 CATGCCATGGCTCAAGGTAAACAGCAAAGGCACCAGGACGCTTATTACCACCTTGATCAA 941285 Query 114960 CATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCAT 115019 |||| || || ||| || || || || ||||| |||| ||| || | ||| | |||| Sbjct 941286 CATATCTGGCAGTGTTGTTGAAAACTCGGAGCATAGGAACGATGCCGTTAGAGTTTCCAT 941345 Query 115020 TTGTCCC--CCGAATACGAGACTTATTGGCTCTGACATCATGGATGTGCATACCAATACC 115077 | || || | || | | | | | || | || || || | | ||||||||| Sbjct 941346 TGGTACCGGCTATGTATGCGCC--AGTAGCACGGATTCGGTGAATATTGAGACCAATACC 941403 Query 115078 CCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGA 115137 || || ||||||||| || || | | | | | |||| || || || || Sbjct 941404 ACCAGCATTCTTTGAGATCATAGCACAAATCTTCAAAGTATCGTAAATACCATCAATACT 941463 Query 115138 GTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTT 115197 ||| |||| | ||||||||||||| || | ||||| ||| ||||| || Sbjct 941464 GTCCTCCTTCATGTCGATAAGGAAGCATGATGAAAGTTGTGCTTGTGGAGTACCCGCAGA 941523 Query 115198 GAAGAGGGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTTATCGTAGGTCTCCA 115256 |||||| ||||| | || || |||| ||| | | |||||| | ||| || || | Sbjct 941524 GAAGAGTGTTGGCGAGGCATGTGTGAA-GTACTTGTTTGACATCAAGTTGTATGTTTCGA 941582 Query 115257 AGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGG 115316 | | |||||| || ||||||||||| | | || ||||| | ||| | ||| | Sbjct 941583 TGGCACTTTCAATGTCATCACCGTGAATACCAACGGCAACACGCATGATCATTTGTTGTG 941642 Query 115317 G 115317 | Sbjct 941643 G 941643 >seq7 Length=2023280 Score = 111 bits (122), Expect = 2e-19 Identities = 153/213 (72%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 126058 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACC 126117 ||||||||| |||||||||||||||||||| || || ||| ||||| | ||||||||| Sbjct 1768265 GTGGAGACCTTCGTCACGGGAGATGAGTTCGTTTGAAAAGGTGAGTCCGGCCATGAGACC 1768206 Query 126118 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACA 126177 |||||||| | |||||| || | || || || ||||| ||||| || || || Sbjct 1768205 ACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGATCCGGAGAAAAAGATACCTTCAACGGC 1768146 Query 126178 CGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTC---AAACCACTTCAT 126234 ||||| || | ||||| | |||||||| | || || | || || ||| || | Sbjct 1768145 AGCGAATGCGACAAGACGTTGAGCAAAGGTG---GAGTTCTTATCTTGAATCCATTTGAC 1768089 Query 126235 CGCCCACTGCGCCTTTTTCTCGATACACGGGAC 126267 ||||| | ||||| |||| ||| || || || Sbjct 1768088 AGCCCAGTCGGCCTTCTTCTTGATGCAAGGAAC 1768056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597350837239600