Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq1 123 3e-23 seq15 120 3e-22 >seq1 Length=3544467 Score = 123 bits (136), Expect = 3e-23 Identities = 171/237 (72%), Gaps = 2/237 (1%) Strand=Plus/Plus Query 41973 ATTTATCGACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTG 42032 || ||| |||| || | | ||| | |||||| ||||| ||||| ||||||||||||||| Sbjct 2377623 ATCTATTGACCACCACGAAGACGGAGCACCAAGTGCAAGGTGCTTTCCTTTTGAATATTG 2377682 Query 42033 TAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGG 42092 ||||| | || || | |||| || | |||||| || || || || | ||| || || Sbjct 2377683 TAATCCGAAAGGGTTCTGCCGTCCTCCAACTGCTTTCCTGCAAAGATCAATCGTTGTTGA 2377742 Query 42093 TCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCT 42151 || | ||| | || |||||||||| ||| | |||| ||| | | | | || || Sbjct 2377743 TCAGGTGGAATGCCCTCCTTGTCC-TGAATCTTTGATTTAACATTATCAATGGTATCTGA 2377801 Query 42152 CGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||||||||| || | || || || ||||| || | ||||| |||||||||||||| Sbjct 2377802 CGATTCCACTTCTAATGTAATTGTCTTGCCAGTCAAGGTCTTGACAAAGATTTGCAT 2377858 >seq15 Length=1659866 Score = 120 bits (132), Expect = 3e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||| |||||||| || | || ||||||||| || |||||||| | || || || | Sbjct 675681 ACGTAACACCAAGTGAAGAGTAGACTCCTTTTGGATGTTGTAATCGGAAAGGGTGCGACC 675622 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || || ||||| || ||||| || | |||||| ||||||| ||| | | |||||| Sbjct 675621 ATCTTCGAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGGTCGGGTGGAATTCCCTCCTT 675562 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 42172 |||| ||| || |||| | | | |||||| || || || |||| ||||| Sbjct 675561 GTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGAT 675502 Query 42173 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 |||||||||||| || ||||| || ||||| ||||| Sbjct 675501 GGTTTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 675466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543210287640800