Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017-
05-31] 370 sequences; 44,096,448 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq15 96.9 3e-15
seq1 95.1 1e-14
>seq15
Length=1659866
Score = 96.9 bits (106), Expect = 3e-15
Identities = 162/232 (70%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || || | ||| || || || || | | ||||||||||| |||||||| |||
Sbjct 675692 CCACCACGGAGACGTAACACCAAGTGAAGAGTAGACTCCTTTTGGATGTTGTAATCGGAA 675633
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || || || |||||||| || |||| |||| | ||||||||||| || ||
Sbjct 675632 AGGGTGCGACCATCTTCGAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGGTCGGGTGGA 675573
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566
|| || || ||||| ||| || || | |||| || | |||||||| ||||| ||
Sbjct 675572 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTG-TCGATGGTGTCGGAAGACTCAAC 675514
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGGCT 138618
||||| || | ||||| || || || || || || || ||||||||| ||
Sbjct 675513 CTCGAGGGTGATGGTTTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGACT 675462
>seq1
Length=3544467
Score = 95.1 bits (104), Expect = 1e-14
Identities = 124/172 (72%), Gaps = 0/172 (0%)
Strand=Plus/Plus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| || ||||||||||| |||| || || || || |||||||| ||||
Sbjct 2378403 GACTCCTTCTGGATGTTGTAGTCACTCAAGGTGCGACCATCTTCAAGTTGTTTTCCGGCG 2378462
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
|||| | |||||||||||| ||||| || || || ||||| ||| || || |
Sbjct 2378463 AAGATCAAACGCTGTTGGTCGGGAGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACG 2378522
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCA 138592
| || | ||||||| | ||||| ||||||| || | || ||||| ||||
Sbjct 2378523 TTGTCGATGGTGTCGCTGGACTCAACCTCGAGGGTAATGGTCTTACCGGTCA 2378574
Score = 89.7 bits (98), Expect = 5e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || || | ||| | || ||||||| | || ||||||||||||||||| ||
Sbjct 2377860 CCACCACGGAGACGAAGGACCAAATGTAAAGTCGATTCCTTTTGAATGTTGTAATCCGAA 2377919
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||||| |||||| ||||| ||||| | | |||| ||||| ||||| || || ||
Sbjct 2377920 AGTGTACGACCGTCCTCAAGTTGCTTACCAGCAAAGATAAGACGTTGTTGATCGGGTGGG 2377979
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566
||||| || || || ||| || || | |||| || | ||| || | || || ||
Sbjct 2377980 ATACCCTCCTTATCTTGGATCTTCGACTTCACATTG-TCGATGGTATCCGATGATTCAAC 2378038
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
||| | || | || || || || || || || || |||||||||||
Sbjct 2378039 CTCCAAAGTGATTGTCTTTCCGGTAAGGGTCTTGACGAAAATCTGCAT 2378086
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496260104786400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |