Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq15 150 2e-31 seq1 116 4e-21 seq12 86.0 6e-12 >seq15 Length=1659866 Score = 150 bits (166), Expect = 2e-31 Identities = 172/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || |||||||| || | |||||||| ||||| || ||||||||| Sbjct 675692 CCACCACGGAGACGTAACACCAAGTGAAGAGTAGACTCCTTTTGGATGTTGTAATCGGAA 675633 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| || || || ||||| ||| ||||||||||||| || ||||| || Sbjct 675632 AGGGTGCGACCATCTTCGAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGGTCGGGTGGA 675573 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || |||||||||||| ||| || ||||| | |||| |||||| | | ||| || Sbjct 675572 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCAACC 675513 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117 |||| ||| | |||||||| || || || || || || ||||||||| || Sbjct 675512 TCGAGGGTGATGGTTTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGACT 675462 >seq1 Length=3544467 Score = 116 bits (128), Expect = 4e-21 Identities = 151/206 (73%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| || | || ||||| || || || ||||| || | | Sbjct 2378370 CCACCACGAAGTCTGAGGACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCACTC 2378429 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| || || |||||||| ||| ||||||| ||||| || |||||||| Sbjct 2378430 AAGGTGCGACCATCTTCAAGTTGTTTTCCGGCGAAGATCAAACGCTGTTGGTCGGGAGGA 2378489 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || |||||||||||| ||| || ||||| |||| |||| |||||| | ||| || Sbjct 2378490 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTG-TCGATGGTGTCGCTGGACTCAAC 2378548 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCA 127091 |||| ||| | || || ||||||| Sbjct 2378549 CTCGAGGGTAATGGTCTTACCGGTCA 2378574 Score = 107 bits (118), Expect = 2e-18 Identities = 155/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| || | ||||||||||| || ||||| |||||| Sbjct 2378088 CCACCACGAAGTCTGAGGACCAAGTGAAGGGTAGACTCTTTCTGGATATTATAATCGGAA 2378147 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| || || || ||||| ||| | ||||| ||||| || |||||||| Sbjct 2378148 AGGGTGCGACCATCTTCCAGTTGCTTTCCGGCGAAAATCAAACGCTGTTGGTCGGGAGGA 2378207 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 ||||| |||||||| || || ||| | |||| |||| |||||| | | ||||| Sbjct 2378208 ATGCCTTCCTTGTCTTGAATCTTAGACTTAACGTTG-TCGATGGTGTCTGAAGATTCGAC 2378266 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 127101 || | ||| | || || ||||| ||||| || || Sbjct 2378267 CTCAAGGGTGATGGTCTTTCCGGTAAGAGTCTTAAC 2378302 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | |||||||||| || || || |||||||| |||||||| Sbjct 2377860 CCACCACGGAGACGAAGGACCAAATGTAAAGTCGATTCCTTTTGAATGTTGTAATCCGAA 2377919 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || ||| || || || || || ||||| |||| | || || |||||||| || Sbjct 2377920 AGTGTACGACCGTCCTCAAGTTGCTTACCAGCAAAGATAAGACGTTGTTGATCGGGTGGG 2377979 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || |||||||| || ||| ||| ||| | | |||| ||| |||| || || Sbjct 2377980 ATACCCTCCTTATCTTGGATCTTCGACTTCACATTGTCGATGGTATCCGATGATTCAACC 2378039 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || || ||||| || || || || ||||||||||| Sbjct 2378040 TCCAAAGTGATTGTCTTTCCGGTAAGGGTCTTGACGAAAATCTGCAT 2378086 >seq12 Length=1765576 Score = 86.0 bits (94), Expect = 6e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 126968 TGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATT 127027 || ||||||||| ||||||| || || ||||||||||| || |||||||||||| ||| Sbjct 99152 TGCTTTCCAGCGAAGATCAAACGTTGTTGATCGGGAGGAATTCCCTCCTTGTCCTGGATC 99093 Query 127028 TTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCG 127087 || ||||| | |||| |||||| | |||||| || | ||| | || ||||| Sbjct 99092 TTGGACTTGACATTGTCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCC 99033 Query 127088 GTCAGAGTTTTTACAAA 127104 || || || || || || Sbjct 99032 GTAAGGGTCTTGACGAA 99016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475498600808800