Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq15 113 4e-20 seq1 105 6e-18 >seq15 Length=1659866 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || || ||||| | ||||| | || || || || ||||||||||| || |||||| Sbjct 675692 CCACCACGGAGACGTAACACCAAGTGAAGAGTAGACTCCTTTTGGATGTTGTAATCGGAA 675633 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | ||| | ||| || | ||| ||||| ||| | |||||||| || ||||| || ||| Sbjct 675632 AGGGTGCGACCATCTTCGAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGGTCGGGTGGA 675573 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293 || || || || || || || || |||| || | ||||||||||||||| || Sbjct 675572 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCAACC 675513 Query 45294 TCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| || | |||||||| || || || || || || || ||||| Sbjct 675512 TCGAGGGTGATGGTTTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 675466 >seq1 Length=3544467 Score = 105 bits (116), Expect = 6e-18 Identities = 140/192 (73%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 || || || || || || ||||||||||||||| | ||| | ||| |||| ||| Sbjct 2378112 TGAAGGGTAGACTCTTTCTGGATATTATAATCGGAAAGGGTGCGACCATCTTCCAGTTGC 2378171 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 ||||| ||| | ||||| || || ||||| || ||||||||||| || ||||||| | || Sbjct 2378172 TTTCCGGCGAAAATCAAACGCTGTTGGTCGGGAGGAATGCCTTCCTTGTCTTGAA-TCTT 2378230 Query 45258 TGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316 | | | || | || | |||||| ||||| ||||| || || || | || || ||||| Sbjct 2378231 AGACTTAACGTTGTCGATGGTGTCTGAAGATTCGACCTCAAGGGTGATGGTCTTTCCGGT 2378290 Query 45317 TAGAGTTTTTAC 45328 ||||| || || Sbjct 2378291 AAGAGTCTTAAC 2378302 Score = 98.7 bits (108), Expect = 9e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 45149 TTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTA 45208 ||||||||| ||||| ||||| | |||| | || ||||| || |||||||| | Sbjct 2377667 TTCCTTTTGAATATTGTAATCCGAAAGGGTTCTGCCGTCCTCCAACTGCTTTCCTGCAAA 2377726 Query 45209 TATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGC 45268 ||||||||||| || || || |||||||| || || || ||||| ||| ||| | Sbjct 2377727 GATCAATCGTTGTTGATCAGGTGGAATGCCCTCCTTGTCCTGAATCTTTGATTTAACATT 2377786 Query 45269 TTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTAC 45328 || | ||| || || || || ||||| | |||| || ||||| || | || || || Sbjct 2377787 ATCAATGGTATCTGACGATTCCACTTCTAATGTAATTGTCTTGCCAGTCAAGGTCTTGAC 2377846 Query 45329 AAAAATTTGCAT 45340 ||| |||||||| Sbjct 2377847 AAAGATTTGCAT 2377858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452001109485200