Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq4 174 2e-38 seq7 105 8e-18 >seq4 Length=2560074 Score = 174 bits (192), Expect = 2e-38 Identities = 1100/1739 (63%), Gaps = 45/1739 (3%) Strand=Plus/Plus Query 115564 TAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTTG 115623 |||||||| || ||||| | ||| ||||| || | |||||| || | | |||| Sbjct 939926 TAGTACATTCCGGTCTTCAAACCCAATTTCCAACCAGCAAAATGCATGGATGTAATCTTG 939985 Query 115624 GAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCC 115683 | ||| ||| | |||| | |||||| ||| |||||||||||||| || Sbjct 939986 CCCATTGTAGGATCCTTCATGTGAATGTTCATTGATTGAGATTGATCGATGAATGCACCA 940045 Query 115684 CGATCCGCCGCCATATCAATCACATCCTTCATCTTGA--TTTCCCACACAGTTCTGTAGA 115741 ||||| || ||||| | || || || ||| | || ||||||| ||||| |||| | Sbjct 940046 CGATCAGCAGCCATTTGAA-CA-ATTGTTCGTTGAGAGATTTCCCAAACAGTCTTGTAAA 940103 Query 115742 GGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCCTTGACCA 115801 | ||| || ||| |||| |||| ||||||||| || || ||||| | | | Sbjct 940104 GAGCCTTGATGTCAGCTGGAATATTGGGGATATTTTGAATGGATCCACCATCAGCAATGA 940163 Query 115802 TGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCCACGAGGTGCT 115861 | | | |||||||| | ||||||||||| || | || |||| | || Sbjct 940164 TACGGTTCTTCATATTGTCAGACCAGAGACCCATATCGACAAGGTCCTTGAGAAGCCATG 940223 Query 115862 TATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGA-TAGATGTTGGTCGTGTAT 115920 || || || || || || || || || | ||| |||||||| | ||||| Sbjct 940224 GGTTAACGACTTGGAATTCTCCGGCAAGAACACGACG-AGAGTAGATGTTTGAAGTGTAA 940282 Query 115921 GGCTCAAAGCACTCATTGTTACCCAAGA-TTTGGGCTGTGGAGGCTGTGGGCATGGGTGC 115979 ||||| || || || ||| | |||||| |||||| |||| || || ||||| ||||| Sbjct 940283 GGCTCGAAACATTCGTTGA-AGCCAAGAATTTGGGATGTGCTAGCAGTAGGCATAGGTGC 940341 Query 115980 CATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTC 116039 | || || |||||||| || | | ||| || ||| | | |||||| || Sbjct 940342 AACTAGGAGAGAGTTGCGGATTCCGTGTTGCTTGATGGATTGCTTCAAAGAGTCCCAATC 940401 Query 116040 GTAGT--TGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCT 116097 | | || | || | ||| |||||||||| | || || ||| | || || Sbjct 940402 CCACAAATCAG-TAGGTGTAACCC-CCCACATATCGTATTGAAGTTCACCCTTAGAGACT 940459 Query 116098 GGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCG 116157 || || || | | | || || |||||||| ||| || | ||| | | Sbjct 940460 GGGGAGCCTTGATAGGTTTCGTATGGGCCAAGTTCCTTTGCGATCTCGACGGAAGAGGTC 940519 Query 116158 AGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAA 116217 | ||| ||||| || || ||||| ||||| | || | ||||| || ||| Sbjct 940520 AAGGCAGCGTGGTAGATGGTCTCGAAAATTTGTATGTTGAGGTGTTTGGCTTCTGGGGAG 940579 Query 116218 TCAAACGCGAGACGGC-ACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAAT 116276 ||||| | ||||| | || ||| |||| || |||||||| ||||||| | || Sbjct 940580 TCAAATGGAAGACGAAGAGCCAAGAAAG-CATCAGCAAGACCTTGAACACCGACCGCGAT 940638 Query 116277 TGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC-ACGGGATAAAAATTCCTATCGA 116335 || ||||| | | ||| ||||| || ||| | || ||||| | || | || | Sbjct 940639 AGGTCGATGACGGAAATTGCTTTTTCGGGCC-TCTGCGACTGGATAGTAGTTGATGTCAA 940697 Query 116336 TAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAA 116395 ||| | |||| | ||| | ||||| | | || |||||||||| | ||||| Sbjct 940698 TAATCTTATTCAAGTTTCTAACAACAACTTGGACAACCTCGTGAAGCTTTTGGAAATCAT 940757 Query 116396 AACTGCGAGTCTC-TTCAT--TGACATACTTAGGAAGGGCGATTGACGCCAGATTACACA 116452 || | | ||| ||||| |||| | | || | ||||| || |||| ||||| Sbjct 940758 AAGTTCC---CTCATTCATGTTGACGAAAGTTGGTAAAGCGATGGAAGCCAAGTTACAGC 940814 Query 116453 CAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAA 116512 || |||||| ||| |||||| | |||||||| |||||||| || || || Sbjct 940815 AAGCAACCTCATCTGGTGCAGAGTACTCGACGATTTCCGTGCACAAATTGGAGCTGCGAA 940874 Query 116513 TGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATG 116572 | || |||| ||||||||| || ||| |||| || ||||||||||| ||||| | | Sbjct 940875 TAGTACCCAGGTTCTTTTGGTTGCTCTTCTTGTTGCATGCATCCTTGTAAAGCATGAAAG 940934 Query 116573 GCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACA 116631 | | || ||||| ||||| | || ||||| | | ||| | | | | || | | | Sbjct 940935 GATTTCCGGTCTCGGTTTGAGCCTCAAGAATGGAGTACCAAAGTTTTTGAGCCTTG-ATA 940993 Query 116632 GTGGCGTTGGCTCGCCCCT------CCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCT 116685 || ||| || |||| ||| ||||| |||||| ||||| ||||| Sbjct 940994 GT---CTTG---CGACCCTTGCCTGCCTTTTCGTAACCCTCGTAGAGAGCCTCGAACTCC 941047 Query 116686 TCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCA 116745 || || | | |||| | ||||| | | || || | ||||| ||| | ||| Sbjct 941048 TCGCCATAAACATCTGCTAAACCTGGACATTCGTTGGGGCACATGAGAGTCCAATCTCCA 941107 Query 116746 CCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGA 116805 || ||||| ||||||||||| || || || ||||| | || |||||||||| || Sbjct 941108 TTCTTTTCAACACGCTTCATGAATAGATCAGGAATCCACAAGGCGTAGAAGAGATCGCGT 941167 Query 116806 CAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCG 116865 ||| ||||||| | || ||||| || | || | || || | | |||||| Sbjct 941168 GCACGAACTTCTTCCTTGCCATGATTTTTGCGTAGATCAAGGAACTCAAAAACATCCGCA 941227 Query 116866 TGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCG---ACGACCAGCCTGGTTTACA 116922 ||||| || || ||||| || || | | || || | |||| | || | ||| Sbjct 941228 TGCCATGGCTCAAGGTAAACAGCAAAGGCACCAGGACGCTTATTACCACCTTGATCAACA 941287 Query 116923 TACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTT 116982 || || || || ||| || || || ||||| |||| ||| || | ||| | ||||| Sbjct 941288 TATCTGGCAGTGTTGTTGAAAACTCGGAGCATAGGAACGATGCCGTTAGAGTTTCCATTG 941347 Query 116983 GTCCC--CCGAATACGAGACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCC 117040 || || | || | | | | || | || ||| || | | ||||||||| | Sbjct 941348 GTACCGGCTATGTATGCGCC--AGTAGCACGGATTCGGTGAATATTGAGACCAATACCAC 941405 Query 117041 CTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGT 117100 | || ||||||||| || || | | | | | |||| || ||||| || || Sbjct 941406 CAGCATTCTTTGAGATCATAGCACAAATCTTCAAAGTATCGTAAATACCATCAATACTGT 941465 Query 117101 CACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGA 117160 | |||| | |||| |||||||| || | ||||| ||| ||||| || || Sbjct 941466 CCTCCTTCATGTCGATAAGGAAGCATGATGAAAGTTGTGCTTGTGGAGTACCCGCAGAGA 941525 Query 117161 AGAGGGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTTATCGTAGGTCTCCAAG 117219 |||| ||||| | || || |||| ||| | | |||||| | ||| || || | | Sbjct 941526 AGAGTGTTGGCGAGGCATGTGTGAA-GTACTTGTTTGACATCAAGTTGTATGTTTCGATG 941584 Query 117220 ACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAAACATGTATTGGGG 117278 || |||||| || ||||||||||| | | || ||||| | ||| | ||| || Sbjct 941585 GCACTTTCAATGTCATCACCGTGAATACCAACGGCAACACGCATGATCATTTGTTGTGG 941643 >seq7 Length=2023280 Score = 105 bits (116), Expect = 8e-18 Identities = 152/213 (71%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 127531 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 127590 ||||||||| |||||||||||||||||||| || || ||| || || | ||||||||| Sbjct 1768265 GTGGAGACCTTCGTCACGGGAGATGAGTTCGTTTGAAAAGGTGAGTCCGGCCATGAGACC 1768206 Query 127591 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 127650 |||||||| | |||||| || | || || || ||||| ||||| || || || Sbjct 1768205 ACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGATCCGGAGAAAAAGATACCTTCAACGGC 1768146 Query 127651 CGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATC---AAACCACTTCAT 127707 ||||| || | ||||| | ||||||| ||| || |||| || ||| || | Sbjct 1768145 AGCGAATGCGACAAGACGTTGAGCAAAGG---TGGAGTTCTTATCTTGAATCCATTTGAC 1768089 Query 127708 CGCCCACTGTGCCTTTTTCTCGATACATGGGAC 127740 ||||| | ||||| |||| ||| || || || Sbjct 1768088 AGCCCAGTCGGCCTTCTTCTTGATGCAAGGAAC 1768056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613504362529200