Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017-
05-31] 370 sequences; 44,096,448 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq15 141 1e-28
seq1 96.9 4e-15
>seq15
Length=1659866
Score = 141 bits (156), Expect = 1e-28
Identities = 161/216 (75%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437
||| ||||||| || | ||| |||||||||||| ||||| ||||| || ||||| |
Sbjct 675681 ACGTAACACCAAGTGAAGAGTAGACTCCTTTTGGATGTTGTAATCGGAAAGGGTGCGACC 675622
Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497
|| ||||| ||||| |||||||| ||||| ||||| ||||||| || | | ||||||
Sbjct 675621 ATCTTCGAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGGTCGGGTGGAATTCCCTCCTT 675562
Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557
|||| |||||| ||||| | | | |||||| || || || || | |||||
Sbjct 675561 GTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGAT 675502
Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|||||||||||| || || || || ||||| |||||
Sbjct 675501 GGTTTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 675466
>seq1
Length=3544467
Score = 96.9 bits (106), Expect = 4e-15
Identities = 151/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437
||| | ||||| ||||| || || |||||||| |||||||| || || || || | |
Sbjct 2377643 ACGGAGCACCAAGTGCAAGGTGCTTTCCTTTTGAATATTGTAATCCGAAAGGGTTCTGCC 2377702
Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497
||| || | |||||| || || || ||||| || || || || | || | || ||||||
Sbjct 2377703 GTCCTCCAACTGCTTTCCTGCAAAGATCAATCGTTGTTGATCAGGTGGAATGCCCTCCTT 2377762
Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557
|||| ||||| || | | | | || || ||||||||| || | || ||
Sbjct 2377763 GTCCTGAATCTTTGATTTAACATTATCAATGGTATCTGACGATTCCACTTCTAATGTAAT 2377822
Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| ||||| |||| || || ||||||||||||||
Sbjct 2377823 TGTCTTGCCAGTCAAGGTCTTGACAAAGATTTGCAT 2377858
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565235785772400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |