Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq15 138 1e-27 seq7 125 7e-24 seq1 104 2e-17 seq12 102 8e-17 >seq15 Length=1659866 Score = 138 bits (152), Expect = 1e-27 Identities = 160/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||||||||||||||||||| |||| || ||| | || Sbjct 675466 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAAACCATCACCCTCGAGGTTGAGTCTTCC 675525 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || || |||| ||||| ||||||||||| |||||||| Sbjct 675526 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCACCCGACCAA 675585 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| | || | ||| || || || || || || | |||||||| ||| |||||| Sbjct 675586 CAGCGATTGATCTTCGCCGGAAAGCAACTCGAAGATGGTCGCACCCTTTCCGATTACAAC 675645 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||||||||| | || || || |||||| | ||| Sbjct 675646 ATCCAAAAGGAGTCTACTCTTCACTTGGTGTTACGT 675681 >seq7 Length=2023280 Score = 125 bits (138), Expect = 7e-24 Identities = 193/275 (70%), Gaps = 3/275 (1%) Strand=Plus/Minus Query 133168 TAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAG 133227 || ||||||||||| || || |||| ||||| | ||||||||| |||||| || Sbjct 1767955 TATGTGTCGATGAGAAGAGAGTATGTTTCGGAGTGAATGTTCTCCATCATGATTTGGAAA 1767896 Query 133228 CCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTT 133287 ||||| ||||| || ||||| | || ||||| | ||| ||||| |||| || Sbjct 1767895 CCGTAGAAGCATCGTGCCTCTGGGATTTGAACTTCACCACTGAATCGCTCAACCAAGTTC 1767836 Query 133288 TCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGC 133347 |||||||| || ||||| |||||||| || || || ||||| |||||| | ||| Sbjct 1767835 TCGTTGACAATTCCGTCTGATGCGGCGAAGAATGCGAGAACGTGGGAGATGAAGTAACGC 1767776 Query 133348 TCGTTGTCGTTCA---AGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCG 133404 |||| || || | | | ||||||| | ||||| |||| || | ||| || Sbjct 1767775 TCGTCATCATTGAGTCTGTTGTTCCAGTCGTGGAGATCCTTTGACAAATCAATCTCTTCT 1767716 Query 133405 ACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 ||||||| || || ||||| || ||||||||||| Sbjct 1767715 GCGGTCCAGAAAGATGCCTCTGCCTTTTTGTACAT 1767681 >seq1 Length=3544467 Score = 104 bits (114), Expect = 2e-17 Identities = 138/189 (73%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 38268 ACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAAGA 38326 || || || ||||| ||| |||| || ||| ||| ||||| | | | |||| | || Sbjct 2378572 ACCGGTAAGACCATTACCCTCGAGGTTGAGTCCAGCGACACCATCGACAACG-TCAAGTC 2378514 Query 38327 AAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAA 38386 || |||| ||||| ||||||||||| ||||||||||||| | || | ||| || || Sbjct 2378513 CAAGATCCAGGACAAGGAGGGAATTCCTCCCGACCAACAGCGTTTGATCTTCGCCGGAAA 2378454 Query 38387 ACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCA 38446 ||| || || || | |||||| | | |||||||||||||| ||||| | || || || Sbjct 2378453 ACAACTTGAAGATGGTCGCACCTTGAGTGACTACAACATCCAGAAGGAGTCCACTCTCCA 2378394 Query 38447 TTTGGTGCT 38455 ||||| || Sbjct 2378393 CTTGGTCCT 2378385 Score = 87.8 bits (96), Expect = 2e-12 Identities = 145/207 (70%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 38250 ATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGC 38309 ||| |||| || || || || || || ||||||||| | || ||||| | | |||| | Sbjct 2378308 ATAGTCGTTAAGACTCTTACCGGAAAGACCATCACCCTTGAGGTCGAATCTTCAGACACC 2378249 Query 38310 GTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCG 38368 | | |||| |||| || || | ||||| || || ||||| ||||||||||||| Sbjct 2378248 ATCGACAACG-TTAAGTCTAAGATTCAAGACAAGGAAGGCATTCCTCCCGACCAACAGCG 2378190 Query 38369 GCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCA 38428 | |||| ||| || || || ||||| || | |||||||| ||| || || ||||| Sbjct 2378189 TTTGATTTTCGCCGGAAAGCAACTGGAAGATGGTCGCACCCTTTCCGATTATAATATCCA 2378130 Query 38429 AAAGGAAGCGACGCTGCATTTGGTGCT 38455 || || | || || || ||||| || Sbjct 2378129 GAAAGAGTCTACCCTTCACTTGGTCCT 2378103 >seq12 Length=1765576 Score = 102 bits (112), Expect = 8e-17 Identities = 131/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || || |||||||| ||||||||| | || |||||| || |||||| | | Sbjct 99016 TTCGTCAAGACCCTTACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACCATC 99075 Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372 | | | || || |||| ||||| ||||||||||| |||| ||||| || | Sbjct 99076 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCTCCCGATCAACAACGTTTG 99135 Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432 || | ||| || || || |||| |||| || || ||| || ||||||||||||||| Sbjct 99136 ATCTTCGCTGGAAAGCAATTGGAAGACGGACGTACTCTCTCAGATTACAACATCCAAAAG 99195 Query 38433 G 38433 | Sbjct 99196 G 99196 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500170486700800