Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq1 118 4e-21 seq12 89.7 2e-12 >seq1 Length=3544467 Score = 118 bits (130), Expect = 4e-21 Identities = 151/208 (73%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 391060 TCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAACATTG 391119 ||||||| || || || || || || || || ||||| || ||||| || || | ||| | Sbjct 2378304 TCGTTAAGACTCTTACCGGAAAGACCATCACCCTTGAGGTCGAATCTTCAGACACCATCG 2378245 Query 391120 AAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTAA 391179 | |||| || |||||||| |||||||| |||||||| || ||||| ||||| | Sbjct 2378244 ACAACGTTAAGTCTAAGATTCAAGACAAGGAAGGCATTCCTCCCGACCAACAGCGTTTGA 2378185 Query 391180 TTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAGG 391239 ||||| | || || ||||| |||||||| | || | | ||||||||||| | || | Sbjct 2378184 TTTTCGCCGGAAAGCAACTGGAAGATGGTCGCACCCTTTCCGATTATAATATCCAGAAAG 2378125 Query 391240 ATGCAACACTTCACTTAGTATTAAGACT 391267 | | || |||||||| || | ||||| Sbjct 2378124 AGTCTACCCTTCACTTGGTCCTCAGACT 2378097 Score = 114 bits (126), Expect = 5e-20 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || || || || ||||||| || || ||||| | || || ||||| || Sbjct 2377858 ATGCAAATCTTTGTCAAGACCTTGACTGGCAAGACAATTACATTAGAAGTGGAATCGTCA 2377799 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| |||||| | ||||| ||| ||||| || ||||| || ||||| ||||||||| Sbjct 2377798 GATACCATTGATAATGTTAAATCAAAGATTCAGGACAAGGAGGGCATTCCACCTGATCAA 2377739 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||||| || || || |||| || || | || || || ||||| | ||||||| ||| Sbjct 2377738 CAACGATTGATCTTTGCAGGAAAGCAGTTGGAGGACGGCAGAACCCTTTCGGATTACAAT 2377679 Query 391230 ATTGATAAGGA 391240 ||| | ||||| Sbjct 2377678 ATTCAAAAGGA 2377668 Score = 102 bits (112), Expect = 3e-16 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| || || || || || || || || ||| | || ||||||||||| Sbjct 2378086 ATGCAGATTTTCGTCAAGACCCTTACCGGAAAGACAATCACTTTGGAGGTTGAATCATCG 2378027 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||| || | | || || || ||||||||||| || || || || |||||| Sbjct 2378026 GATACCATCGACAATGTGAAGTCGAAGATCCAAGATAAGGAGGGTATCCCACCCGATCAA 2377967 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||| | || || | || || |||||||| || || | || | ||||||| || Sbjct 2377966 CAACGTCTTATCTTTGCTGGTAAGCAACTTGAGGACGGTCGTACACTTTCGGATTACAAC 2377907 Query 391230 ATTGATAAGGA 391240 ||| | ||||| Sbjct 2377906 ATTCAAAAGGA 2377896 Score = 91.5 bits (100), Expect = 6e-13 Identities = 140/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 391068 ACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAACATTGAAGCTATT 391127 ||| |||| ||||| || ||||| || || ||||| || || | ||| || | Sbjct 2378578 ACAGTGACCGGTAAGACCATTACCCTCGAGGTTGAGTCCAGCGACACCATCGACAACGTC 2378519 Query 391128 AAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTAATTTTCTCA 391187 || || || || || ||||| ||||||||||| || ||||| ||||| || ||| | Sbjct 2378518 AAGTCCAAGATCCAGGACAAGGAGGGAATTCCTCCCGACCAACAGCGTTTGATCTTCGCC 2378459 Query 391188 GGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAGGATGCAACA 391247 || ||||||||||||||||| | || ||| || || || || | ||||| | || Sbjct 2378458 GGAAAACAACTTGAAGATGGTCGCACCTTGAGTGACTACAACATCCAGAAGGAGTCCACT 2378399 Query 391248 CTTCACTTAGTATTAAGACT 391267 || ||||| || | ||||| Sbjct 2378398 CTCCACTTGGTCCTCAGACT 2378379 >seq12 Length=1765576 Score = 89.7 bits (98), Expect = 2e-12 Identities = 132/187 (71%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 391053 AATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGAT 391112 |||| ||||| || || || || || || || || || ||||| || || || || || Sbjct 99010 AATAGCTTCGTCAAGACCCTTACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGAC 99069 Query 391113 AACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAA 391172 | ||| || | | || || || || || ||||| ||||||||||| ||||||||| Sbjct 99070 ACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCTCCCGATCAACAA 99129 Query 391173 CGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATT 391232 ||||| || ||| | || || ||| | ||||| ||| | ||| | | ||||| || || Sbjct 99130 CGTTTGATCTTCGCTGGAAAGCAATTGGAAGACGGACGTACTCTCTCAGATTACAACATC 99189 Query 391233 GATAAGG 391239 | |||| Sbjct 99190 CAAAAGG 99196 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975709033859960