Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq1 187 2e-41 seq2 129 4e-24 seq12 98.7 8e-15 seq13 89.7 4e-12 seq5 87.8 1e-11 >seq1 Length=3544467 Score = 187 bits (206), Expect = 2e-41 Identities = 490/740 (66%), Gaps = 16/740 (2%) Strand=Plus/Minus Query 517979 TTATATTTTCTCTTGAAATCTTCA-ACACACCATGTT--ACAAGACGATTATCAAAATCT 518035 |||| ||| |||||||| |||| | ||| || | |||||||| || ||||| || Sbjct 2295854 TTATGTTTCCTCTTGAA---TTCAGAGACAAAGTGGTTAACAAGACGGTTGTCAAAGTCC 2295798 Query 518036 TCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGA 518095 ||||| ||||| | ||| | || | || | | || | ||| | || || || | Sbjct 2295797 TCACCACCCAAGTGAGTGTCACCAGCGGTGGACTTGACCTCGAAGATACCCTCCTCGATG 2295738 Query 518096 GACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCT 518155 | ||| |||| ||||| |||||| ||||| | ||| || || || || || ||| Sbjct 2295737 GTCAAGAGAGAGACATCGAAGGTTCCTCCACCAAGATCGAAGATGAGAACGTTACGTTCA 2295678 Query 518156 TTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATT 518215 || || || || | ||| || |||| ||||| || || || || || || || Sbjct 2295677 CCCTCGATCTTCTTGTCCAAACCGTAAGCAATGGCAGCTGCGGTAGGCTCGTTGATGATA 2295618 Query 518216 CTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCG 518275 | | ||| |||||||||||||| || || || || || ||||| | |||||||||| Sbjct 2295617 CGGAGAACGTTAAGACCAGCAATGAGACCAGCGTCCTTGGTAGCTTGACGTTGTGAATCG 2295558 Query 518276 TTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTT 518335 | || || || || || || | ||||| | | || | ||| | ||||| Sbjct 2295557 GTGAAGTAAGCTGGGACTGTGACGACGGCGTTGTTGACAGTTCCACCGAGGTAAGCCTCA 2295498 Query 518336 GCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATATTGCTTG 518395 || || | | |||| || || ||||| || || |||| |||||| | |||| ||| Sbjct 2295497 GCGGTCTCTCTCATCTTGACCAAGATCATGGAAGAGATTTCTTCTGGTGTGAATTGTTTG 2295438 Query 518396 GATTCATT---TTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTA 518452 ||| | |||| | || |||| ||| || || | ||| || || Sbjct 2295437 --TTCTCTCCCTTGA-ACTCGACCTCAATGACTGGCTTTCCGGCACGGTCAATGACCTTG 2295381 Query 518453 AATGGCCAGTATTTCATATCTGATTGAACACTTTGG--TCATTAAAATCTCTACCAATTA 518510 ||||| ||| |||||||| | |||| |||| | || ||| | | |||||| | Sbjct 2295380 AATGGGAAGTGCTTCATATCGGCTTGA--ACTTCAGCATCTGCAAACTTGCGACCAATCA 2295323 Query 518511 ATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCAT 518570 | || || ||||| || | ||| ||| |||| || || || |||||| || || |||| Sbjct 2295322 AACGCTTCGCATCGAAGACAGTGTTGATTGGGTTCATGGCGACTTGATTCTTAGCAGCAT 2295263 Query 518571 CTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTT 518630 |||| |||||| | || || ||||| || | ||| | ||||| || || || || |||| Sbjct 2295262 CTCCGATCAGACGCTCGGTATCTGTGAAGGCAACGAAGGATGGTGTGGTACGGTTTCCTT 2295203 Query 518631 GATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTG 518690 | || ||||| |||||||| | | || ||| | | | |||||||||| | || | Sbjct 2295202 GGTCGTTCGCGATAATTTCGATTCTATCATCACGAAAGATACCTACACAAGAGTAGGTAG 2295143 Query 518691 TTCCTAAATCAATACCAATA 518710 | || ||||| ||||||||| Sbjct 2295142 TACCCAAATCGATACCAATA 2295123 Score = 95.1 bits (104), Expect = 9e-14 Identities = 243/368 (66%), Gaps = 3/368 (1%) Strand=Plus/Minus Query 517274 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 517333 || || || ||||| | ||| || ||||| |||||||| || || || | | |||||| Sbjct 2296826 ATTCCGTTAGCATCAAGATCGAAGGTGACCTCAATTTGTGGAACACCACGTGGTGCAGGT 2296767 Query 517334 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 517393 ||||| || | | || | |||| | || || || || ||| || || ||| Sbjct 2296766 GGGATACCAGTGAGCTCGAACTTGCCCAAAAGGTTGTTGTCCTTGGTGCGTTGACGCTCA 2296707 Query 517394 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG 517453 |||||||| | |||||| || ||| ||| || || || | || | || || | Sbjct 2296706 CCCTCGAAGACTTGGATGAGGACACCAGGTTGGTTGTCAGAGAAGGTGGAGAAGACCTCG 2296647 Query 517454 GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTGCT 517513 || || || || || || |||||||| ||| | |||||||| ||||| || Sbjct 2296646 GACTTCTTGGTTGGGATGGTGGTGTTTCTTGGAATGAGCTTGGTCATCTGTCCACCAGCA 2296587 Query 517514 GTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATAT--TTTGAAGTTTTT 517571 || || | ||| ||||| | || | |||||| | |||| || | || | | || Sbjct 2296586 GTCTCGATACCGAGAGACAATGGGGCGACATCGAGGAGGAGGATCTCGTTGGTGGACTTG 2296527 Query 517572 CATCA-GTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCA 517630 | | || | |||| ||||| || || || | |||||||| ||||||||||| ||| Sbjct 2296526 GAGGAAGTGTCACCAGAGAGAATGGCAGCCTGGACGGCAGCACCGTATGCAACAGCCTCA 2296467 Query 517631 TCAGGATT 517638 ||||| || Sbjct 2296466 TCAGGGTT 2296459 >seq2 Length=3453044 Score = 129 bits (142), Expect = 4e-24 Identities = 172/236 (73%), Gaps = 5/236 (2%) Strand=Plus/Minus Query 668849 TTAAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATGTCT 668908 ||||| ||||| ||||||||| || | ||||||||||||||||| |||||||| | ||| Sbjct 2128674 TTAAG-GGTAAGGAAGGTCGTCTTCGTGGAAATTTGATGGGAAAGCGTGTCGACTTCTCT 2128616 Query 668909 GCACGTACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTCCTCTT 668968 || ||||| || |||||| |||||||||| | |||| |||| |||||||| |||| Sbjct 2128615 GCCCGTACTGTCATTACTGGTGATCCCAATCTCTCTCTAGATGAGGTTGGTGTCCCTCGA 2128556 Query 668969 ATTATTGCTAAAAATCTTACTTTTGACGAAATTGTAACAGAACATAATATTGAGTATTTG 669028 | |||||| | || || || | | || | ||| ||| || ||||| || | ||| Sbjct 2128555 AGTATTGCAAGAATCCTCACATATCCGGAGACTGTTACACCACTGAATATCGATAAATTG 2128496 Query 669029 ACTCAATTAGTGAAAAATGGT--AAAAGAGTATATCCGGGTGCCAATTTTGTAATC 669082 ||| | || || |||||| | | ||| |||| ||||| || | ||| ||| Sbjct 2128495 CATCAGCTTGTTAAGAATGGTCCAGATGAG--CATCCTGGTGCTAAATATGTCATC 2128442 Score = 95.1 bits (104), Expect = 9e-14 Identities = 206/306 (67%), Gaps = 8/306 (3%) Strand=Plus/Minus Query 518025 TATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTC 518084 |||| ||||||| ||||||||| | || | || | ||||| | || ||| | | Sbjct 3296819 TATCGAAATCTTGACCTCCCAAATGGGTGTCACCGGCAGTAGCCTTAACAGTGAAGACAC 3296760 Query 518085 CATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTA 518144 || ||| | | ||||| ||||| ||||||||||| | ||| | || || | Sbjct 3296759 CACCTTGGATGTTAAGAAGAGAAACATCGAAAGTTCCACCACCGAGATCGTAGATGAGAA 3296700 Query 518145 CATTCATTTCTTTGTCTTGGTTTTT-----ATCAAGACCATACGCAAAAGCAGCAGCAGT 518199 | || ||||||| ||| ||| | ||||||| || |||| |||||||| || Sbjct 3296699 CGTTACGCTCTTTGT--TGGACTTTCCAGCACCAAGACCGTAAGCAATGGCAGCAGCGGT 3296642 Query 518200 TGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGC 518259 || || ||||| || | | || ||||||||||| ||| || ||||| || || || Sbjct 3296641 AGGCTCGTTAATGATACGGAGGACGTTAAGACCAGCGATTGCACCAGCATCCTTGGTAGC 3296582 Query 518260 TTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTA-CTTCTT 518318 ||| | ||| ||||| || || || || ||||| || ||||| | || | |||||| Sbjct 3296581 TTGACGTTGGTTGTCGTTGAAGTAAGCTGGGACAGTGATGACGGCTTTTGTGACCTTCTT 3296522 Query 518319 TACCAA 518324 |||| Sbjct 3296521 GCCCAA 3296516 >seq12 Length=1765576 Score = 98.7 bits (108), Expect = 8e-15 Identities = 105/139 (76%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 518168 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 518227 || || | ||| || || | ||| ||||||||||| || || | || ||| | ||| || Sbjct 561518 TTCTCCAAACCGTAAGCGAGAGCGGCAGCAGTTGGCTCGTTGACAACTCTGAGAACGTTC 561459 Query 518228 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 518287 | ||| |||||| || ||||| ||||| ||||| | ||| |||||||| || ||||| Sbjct 561458 AAACCGGCAATTTGACCAGCATCCTTAGTAGCTTGACGTTGGGAATCGTTGAAGTATGCG 561399 Query 518288 GGAACAGTAATAACGGCAT 518306 ||||| |||| ||||||| Sbjct 561398 GGAACGGTAACGACGGCAT 561380 >seq13 Length=1759894 Score = 89.7 bits (98), Expect = 4e-12 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 366982 AAAATAAAAATTGTAGTAGCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTT 367041 || || ||| | || || || || || |||||||||||||| || | |||| ||| || Sbjct 438098 AATATCAAAGTCGTGGTTGCAACGATTGCATTTGGTATGGGCATCGACAAACAGGACGTC 438039 Query 367042 AGAGTTGTTATTCATTATGGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGT 367101 || |||| ||||||||| | |||||| | | ||||||||||| || |||| ||| Sbjct 438038 CGATTTGTCATTCATTATTGTCTTCCCAAAACCTTAGAAGGTTATTACCAGGAAACTGGA 437979 Query 367102 AGAGCAGGTCGTGATGG 367118 |||| ||||| ||||| Sbjct 437978 CGAGCTGGTCGAGATGG 437962 >seq5 Length=2273674 Score = 87.8 bits (96), Expect = 1e-11 Identities = 191/284 (67%), Gaps = 13/284 (5%) Strand=Plus/Minus Query 518026 ATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCC 518085 ||| |||||||| |||||||| | ||| | || | |||| || | || | || Sbjct 1575942 ATCGAAATCTTCTCCTCCCAAGTGAGTGTCACCGGCAGTAGAAAGAACCTCAAAGACACC 1575883 Query 518086 ATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAA---AATAAG 518142 | |||| || | ||||| |||||| |||||| ||||| | |||| | ||| | Sbjct 1575882 ACGATCAATGGAGAGAAGAGAAACATCAAAGGTTCCTCCACCGAGATCATAGACAATGAT 1575823 Query 518143 T--ACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTT 518200 | || |||| | | |||||| || | ||| || |||| ||| || || || Sbjct 1575822 TTGACGTTCACCT-TCAGTCTTG-------TCCAAACCGTAGGCAATAGCTGCGGCGGTA 1575771 Query 518201 GGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCT 518260 ||||| || | || | | ||| || | ||| ||||| | || ||||| || |||||| Sbjct 1575770 GGTTCGTTGACGATACGGAGAACGTTCAAACCGGCAATGATACCGGCATCCTTGGTGGCT 1575711 Query 518261 TGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGC 518304 |||||||| ||||| || || || |||||||||| ||| || Sbjct 1575710 TGTCTTTGGTTGTCGTTGAAGTAAGCTGGAACAGTAACAACTGC 1575667 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780804039381220