Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq4 214 2e-50 seq7 131 2e-25 >seq4 Length=2560074 Score = 214 bits (236), Expect = 2e-50 Identities = 1160/1814 (64%), Gaps = 63/1814 (3%) Strand=Plus/Minus Query 111546 TATTTTGGTCTCAAGACCCTCGAGAAAAGCTACCTCCAAAGACTGGATGGTGTCTTGATG 111605 || ||||| ||||||| |||||| | ||||| | | | || ||||| | Sbjct 941709 TACTTTGGATTCAAGACTCTCGAGCGATCATACCTTCTACGTCTTGATGGCAAAGTTGCA 941650 Query 111606 GAAACCCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGAT 111665 ||| ||||| | ||| ||||||| || || | ||||| || || || || ||||| Sbjct 941649 GAACGTCCACAACAAATGATCATGCGTGTTGCCGTTGGTATTCACGGTGATGACATTGAA 941590 Query 111666 TCTGTTTTGGAGACATACGACAAGATGTCCCGTG-GTATGTTCATCCACGCAACACCAAC 111724 || | || |||||| || |||||| ||| |||| || || | ||||| Sbjct 941589 AGTGCCATCGAAACATACAACTTGATGTCAAACAAGTAC-TTCACACATGCCTCGCCAAC 941531 Query 111725 CCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAA 111784 |||||| || ||||| ||| | | ||| | || || |||||||| | | || Sbjct 941530 ACTCTTCTCTGCGGGTACTCCACAAGCACAACTTTCATCATGCTTCCTTATCGACATGAA 941471 Query 111785 GGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTG 111844 |||||| || |||| ||||||| ||| | | ||||| ||||||||| Sbjct 941470 GGAGGACAGTATTGATGGTATTTACGATACTTTGAAGATTTGTGCTATGATCTCAAAGAA 941411 Query 111845 GGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTAT-TAGA- 111902 ||||||||||| || | | || || || | || | | | | || ||| Sbjct 941410 TGCTGGTGGTATTGGTCTCAATATTCACCGAATCCGTGCTACT--GGCGCATACATAGCC 941353 Query 111903 GGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 111962 ||||| ||||| | || | || || |||| ||||| || || || ||| ||| || Sbjct 941352 GGTACCAATGGAAACTCTAACGGCATCGTTCCTATGCTCCGAGTTTTCAACAACACTGCC 941293 Query 111963 CGCTATGTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAG 112016 | ||||| | |||| ||| ||||| || | | || || || |||||| Sbjct 941292 AGATATGTTGATCAAGGTGGTAATAAGCGTCCT---GGTGCCTTTGCTGTTTACCTTGAG 941236 Query 112017 CCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAG 112076 |||||||| |||||| | | ||||||||||| | || || || || | || || Sbjct 941235 CCATGGCATGCGGATGTTTTTGAGTTCCTTGATCTACGCAAAAATCATGGCAAGGAAGAA 941176 Query 112077 GCGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGT 112135 | || ||| ||||||||||||| ||| | |||||||| ||||| ||||||||| | || Sbjct 941175 GTTCG-TGCACGCGATCTCTTCTACGCCTTGTGGATTCCTGATCTATTCATGAAGCGTGT 941117 Query 112136 TGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGC 112195 ||| ||| ||| ||||| ||||| | || || || | || ||| | | |||| Sbjct 941116 TGAAAAGAATGGAGATTGGACTCTCATGTGCCCCAACGAATGTCCAGGTTTAGCAGATGT 941057 Query 112196 CGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGC 112255 || |||||||| || || |||||| ||||| ||| || | | | | || Sbjct 941056 TTATGGCGAGGAGTTCGAGGCTCTCTACGAGGGTTACGA-AAAGGCAGGCAAGGGTC-GC 940999 Query 112256 --GACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGT 112313 ||| | ||| | | ||| | | ||||| || ||||||||||||| || Sbjct 940998 AAGACTATCAAGGCTCAAAAACTTTGGTACTCCATTCTTGAGGCTCAAACCGAGACCGGA 940939 Query 112314 ACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGT 112373 | || | ||||||||||| || || || ||| | ||||| || |||||||| ||||| Sbjct 940938 AATCCTTTCATGCTTTACAAGGATGCATGCAACAAGAAGAGCAACCAAAAGAACCTGGGT 940879 Query 112374 GTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACG 112433 || || ||||| | || || |||||| | || | | | ||||||| Sbjct 940878 ACTATTCGCAGCTCCAATTTGTGCACGGAAATCGTCGAGTACTCTGCACCAGATGAGGTT 940819 Query 112434 GCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAG-AC 112492 ||| |||||| | || || |||||| | |||| | | | | || | | || Sbjct 940818 GCTTGCTGTAACTTGGCTTCCATCGCT-TTACCAACTTTCGTCAACATGAATGAGGGAAC 940760 Query 112493 ATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGT 112552 | ||||| |||| || ||||| ||| || ||| | |||| | || | | Sbjct 940759 TTATGATTTCCAAAAGCTTCACGAGGTTGTCCAAGTTGTTGTTAGAAACTTGAATAAGAT 940700 Query 112553 TATTGATAGAAATTTTTACCCCGTTG-AGACTGCTCGTAAATCTAATATGAGACACCGTC 112611 |||||| | || | || || || | ||| || || ||| ||| | | || || | Sbjct 940699 TATTGACATCAACTACTATCCAGTCGCAGA-GGCCCGAAAAAGCAATTTCCGTCATCGAC 940641 Query 112612 CAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCAT---TCTTTGTCGCCACGCAT 112668 | || | ||||||| |||||||| || |||| ||| | |||| ||| | ||| Sbjct 940640 CTATCGCGGTCGGTGTTCAAGGTCTTGCTGATGCTTTCTTGGCTCTTCGTCTTC---CAT 940584 Query 112669 TTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCG 112728 |||| ||| ||||| || | |||| | || || ||||| || || ||||| | Sbjct 940583 TTGACTCCCCAGAAGCCAAACACCTCAACATACAAATTTTCGAGACCATCTACCACGCTG 940524 Query 112729 CTCTTGAGGCGAGTTCG--GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGG 112786 | ||||| | | || ||| | ||| ||| ||| ||||| ||||||| | | || Sbjct 940523 C-CTTGA-CCTCTTCCGTCGAGATCGCAAAGGAACTTGGCCCATACGAAACCTATCAAGG 940466 Query 112787 TTCTCCAGCTTCACAAGGGGTG--CTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT- 112843 || |||| || | | ||||| ||||||| |||||||||| ||| | ||| | || Sbjct 940465 CTCCCCAG--TCTCTAAGGGTGAACTTCAATACGATATGTGGG-GGGTTACACCTA-CTG 940410 Query 112844 -TCACTACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTC 112902 | | || |||||| || | ||| || ||||||| | | || | || ||| || Sbjct 940409 ATTTGTGGGATTGGGACTCTTTGAAGCAATCCATCAAGCAACACGGAATCCGCAACTCTC 940350 Query 112903 TTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAA-TCTTGGGTAATAATGAATGC 112961 | | | ||||| ||||| || || ||| | |||| |||||| | || ||||| Sbjct 940349 TCCTAGTTGCACCTATGCCTACTGCTAGCACATCCCAAATTCTTGGCT-TCAACGAATGT 940291 Query 112962 TTTGAACCCTACACGACGAACATCTA-TCTGAGAAGAACCCTCGCGGGAGAGTTTGTGAT 113020 || || || ||||| | |||||||| ||| | | || || ||||| || | Sbjct 940290 TTCGAGCCTTACACTTCAAACATCTACTCT-CGTCGTGTTCTTGCCGGAGAATTCCAAGT 940232 Query 113021 TGTCAACAAGCAT--CTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATG 113078 || ||| ||| || | | ||||| || || ||||||||||| | ||||| Sbjct 940231 CGTTAAC--CCATGGCTTCTCAAGGACCTTGTCGATATGGGTCTCTGGTCTGACAATATG 940174 Query 113079 AAGGA---TCTCA-TGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGA 113134 ||| | | ||| || ||| ||||| |||||||||||||| ||||||||| Sbjct 940173 AAGAACCGTATCATTGCTGA----TGGTGGATCCATTCAAAATATCCCCAATATTCCAGC 940118 Query 113135 TGAAATTAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGA--TGTCATTGAC 113192 ||| || ||| | ||| || |||||||||||| | || || | || | Sbjct 940117 TGACATCAAGGCTCTTTACAAGACTGTTTGGGAAATC--TCTCAACGAACAATTGTTCAA 940060 Query 113193 ATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTATTCATGGAA 113252 ||||| || ||||||||| ||||| |||||| |||| ||||| | |||| | Sbjct 940059 ATGGCTGCTGATCGTGGTGCATTCATCGATCAATCTCAATCAATGAACATTCACATGAAG 940000 Query 113253 AGTCCAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAA 113312 ||| || ||| |||| | | || ||||| | ||||||| |||| | || Sbjct 939999 GATCCTACAATGGGCAAGATTACATCCATGCATTTTGCTGGTTGGAAATTGGGTTTGAAG 939940 Query 113313 ACGGGGATGTATTA 113326 || || ||||| || Sbjct 939939 ACCGGAATGTACTA 939926 >seq7 Length=2023280 Score = 131 bits (144), Expect = 2e-25 Identities = 158/214 (74%), Gaps = 6/214 (3%) Strand=Plus/Plus Query 102110 AGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTT---GATACAAAGTC 102166 |||||| || || | ||||| || || |||||| | || ||| || |||| || || Sbjct 1768055 AGTTCCTTGCATCAAGAAGAAGGCCGACTGGGCTGTCAAATGGATTCAAGATAAGAACTC 1768114 Query 102167 GCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGG 102226 |||||||| | || || ||||||| || ||||| |||||||| ||||| || Sbjct 1768115 CA---CCTTTGCTCAACGTCTTGTCGCATTCGCTGCCGTTGAAGGTATCTTTTTCTCCGG 1768171 Query 102227 TTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTC 102286 |||||| | |||| | |||||||||||||| ||||||||| | || ||| ||| || Sbjct 1768172 ATCCTTCGCCTCTATCTTCTGGCTCAAGAAGCGTGGTCTCATGGCCGGACTCACCTTTTC 1768231 Query 102287 CAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 ||||| || ||||| |||||||| || |||||| Sbjct 1768232 AAACGAACTCATCTCCCGTGACGAAGGTCTCCAC 1768265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620739529066400