Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq4 244 1e-59 seq12 84.2 3e-11 >seq4 Length=2560074 Score = 244 bits (270), Expect = 1e-59 Identities = 1180/1835 (64%), Gaps = 75/1835 (4%) Strand=Plus/Plus Query 105581 GCCTTAGATCGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATATGC 105640 ||| ||| || | ||||||||| |||||||| | || |||||| | | |||| Sbjct 939911 GCCATAGTACGTAAATAGTACATTCCGGTCTTCAAACCCAATTTCCAACCAGCAAAATGC 939970 Query 105641 ATAGAAGAGAGCTTGGACATCGTTGGACTTTCCATGAAAAGATTCATACTTTGACTCTGG 105700 || || | | |||| ||| || ||| | |||| || ||||| |||| || Sbjct 939971 ATGGATGTAATCTTGCCCATTGTAGGATCCTTCATGTGAATGTTCATTGATTGAGATTGA 940030 Query 105701 TCAATGAAGCGACCACGTTGTGCCGCCATATCAATGACA--TCCTTCATCTTGATTTCCC 105758 || ||||| |||||| | || ||||| | || | || || | |||||||| Sbjct 940031 TCGATGAATGCACCACGATCAGCAGCCATTTGAACAATTGTTCGTTGAGA--GATTTCCC 940088 Query 105759 ACACTGTGCGGTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAAC 105818 | || || ||| ||| |||||| ||| |||| |||| | |||||||||||| || | Sbjct 940089 AAACAGTCTTGTAAAGAGCCTTGATGTCAGCTGGAATATTGGGGATATTTTGAATGGATC 940148 Query 105819 CCCCCGCCTTGACCATGAGATCCTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGAT 105878 | || | | || | | |||||||| | ||||| ||||| || | || | Sbjct 940149 CACCATCAGCAATGATACGGTTCTTCATATTGTCAGACCAGAGACCCATATCGACAAGGT 940208 Query 105879 CATTGACGAG--ATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGA-T 105935 | |||| || ||| ||| || | || ||||| || || | | ||| | Sbjct 940209 CCTTGAGAAGCCATGG--GTTAACGACTTGGAATTCTCCGGCAAGAACACGACG-AGAGT 940265 Query 105936 AGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGA-TTTGTGCGGTGGAG 105994 ||||||| | ||||| || || || ||||| || | |||||| |||| | ||| Sbjct 940266 AGATGTTTGAAGTGTAAGGCTCGAAACATTCGTTGA-AGCCAAGAATTTGGGATGTGCTA 940324 Query 105995 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCC 106054 || || ||||| ||||| | | ||| ||| || | || | || ||||||| || | Sbjct 940325 GCAGTAGGCATAGGTGCAACTAGGAGAGAGTTGCGGATTCCGTGTTGCTTGATGGATTGC 940384 Query 106055 TTGAGAACATCCCAGTCGTAGT--TGAGCTTGGTTTCACCTTCCCACATATCAAATTGAA 106112 || | | ||||| || | | || | ||| | ||| |||||||||| |||||| Sbjct 940385 TTCAAAGAGTCCCAATCCCACAAATCAG-TAGGTGTAACCC-CCCACATATCGTATTGAA 940442 Query 106113 G--CACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGC 106170 | ||||| | | ||| ||||| || | | | || || || | || | | | || Sbjct 940443 GTTCACCCTTAGAGACTGGGGAG--CCTTGATAGGTTTCGTATGGGCCAAGTTCCTTTGC 940500 Query 106171 CAATTC-ACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCA 106229 | || || | || ||| | ||||| || ||||| || || || | || | Sbjct 940501 GATCTCGACGGAAGAGGTCAAGGCA-GCGTGGTAGATGGTCTCGAAAATTTGTATGTTGA 940559 Query 106230 TCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAA--AATAAATACATCCGCGAG 106287 | |||||||| || ||||||| | || | | | || ||| |||| || || Sbjct 940560 GGTGTTTGGCTTCTGGGGAGTCAAATG-GAAGACGAAGAGCCAAGAAAG-CATCAGCAAG 940617 Query 106288 ACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCT-CAA 106346 |||||||||||| | | ||||||| || || | ||| ||||| || ||| | | Sbjct 940618 ACCTTGAACACCGACCGCGATAGGTCGATGACGGAAATTGCTTTTTCGGGCC-TCTGCGA 940676 Query 106347 CGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATT- 106405 | ||||| | || ||||||| | || | ||| | ||||| ||| | | Sbjct 940677 CTGGATAGTAGTTGATGTCAATAATCTTATTCAAGTTTCTAACAACAA-CTTGGACAACC 940735 Query 106406 TCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTC-TTCAT--TGACATACTTTGGAAGG 106462 || ||||| |||| ||||| |||| | ||| ||||| |||| | |||| | Sbjct 940736 TCGTGAAGCTTTTGGAAATCATAAGTTCC---CTCATTCATGTTGACGAAAGTTGGTAAA 940792 Query 106463 GCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCT 106522 ||||| || ||||| || || ||| |||||| | | |||||| | ||||| Sbjct 940793 GCGATGGAAGCCAAGTTACAGCAAGCAACCTCATCTGGTGCAGAGTACTCGACGATTTCC 940852 Query 106523 GTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCAC 106582 || ||||| ||||| || ||| || |||| ||||||||||| ||||| |||||||| Sbjct 940853 GTGCACAAATTGGAGCTGCGAATAGTACCCAGGTTCTTTTGGTTGCTCTTCTTGTTGCAT 940912 Query 106583 GCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTC 106642 ||||||||||| |||||| | || | || ||||| || || | || ||||| | | | Sbjct 940913 GCATCCTTGTAAAGCATGAAAGGATTTCCGGTCTCGGTTTGAGCCTCAAGAATGGAGTAC 940972 Query 106643 CACACATCGGCGGC--TGGTACAATGGCGTTGGCCCGTCCCT-CCGCCTCGTACTTTGTG 106699 || | | || || || | || | ||| | ||| || ||||| | Sbjct 940973 CAAAGTTTTTGAGCCTTGATAGTCTTGC---GACCCTTGCCTGCCTTTTCGTAACCCTCG 941029 Query 106700 TAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAG 106759 ||||| || || |||||||| || | || | | |||||| | || || || Sbjct 941030 TAGAGAGCCTCGAACTCCTCGCCATAAACATCTGCTAAACCTGGACATTCGTTGGGGCAC 941089 Query 106760 AAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGG 106819 | |||| ||| | ||| || ||||| ||||||||||| || || |||||||||| | Sbjct 941090 ATGAGAGTCCAATCTCCATTCTTTTCAACACGCTTCATGAATAGATCAGGAATCCACAAG 941149 Query 106820 GATGAAAAGAGATCTC-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAG 106878 | | |||||||| | | || ||| | ||||| | || || || |||| ||||| Sbjct 941150 GCGTAGAAGAGATCGCGTGCA-CGAACTTCTTCCTTGCCATGATTTTTGCGTAGATCAAG 941208 Query 106879 GAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACG 106938 |||||| | | |||||| |||||||||||||| || || || | | || |||| Sbjct 941209 GAACTCAAAAACATCCGCATGCCATGGCTCAAGGTAAACAGCAAAGGCACC---AGGACG 941265 Query 106939 C------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAAT 106992 | ||| |||||| ||||| | || ||| ||| || || || ||||| |||| Sbjct 941266 CTTATTACCACCTTGATCAACATATCTGGCAGTGTTGTTGAAAACTCGGAGCATAGGAAC 941325 Query 106993 AATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATG 107052 || || | || | ||||| || || | || ||| || | | || | Sbjct 941326 GATGCCGTTAGAGTTTCCATTGGTACC-------GGCTATGTAT--GCGCCAGTAGCACG 941376 Query 107053 GAT---GTGCAT------CCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGT 107103 ||| ||| || |||||||| ||||| ||||||||| ||||| | | Sbjct 941377 GATTCGGTGAATATTGAGACCAATACCACCAGCATTCTTTGAGATCATAGCACAAATCTT 941436 Query 107104 AAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGA 107163 | ||| | || ||||| | || ||||||||| || ||||||||||||| || Sbjct 941437 CAAAGTATCGTAAATACCATCAATACTGTCCTCCTTCATGTCGATAAGGAAGCATGATGA 941496 Query 107164 CATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACC 107223 | || | | ||| ||||| ||| |||||| ||||| | || || |||| ||| Sbjct 941497 AAGTTGTGCTTGTGGAGTACCCGCAGAGAAGAGTGTTGGCGAGGCATGTGTGAA-GTACT 941555 Query 107224 T-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGA 107282 | | |||||| || |||||| || | | || |||||||| || ||||| || || | Sbjct 941556 TGTTTGACATCAAGTTGTATGTTTCGATGGCACTTTCAATGTCATCACCGTGAATACCAA 941615 Query 107283 TGGCCACACGCATAAACATGTATTGGGGTGTTTCCATGAGGATGCCATCGAGCCGTTGAA 107342 ||| |||||||| | ||| | ||| || ||| | ||||||| || ||| ||| Sbjct 941616 CGGCAACACGCATGATCATTTGTTGTGGACGTTCTGCAACTTTGCCATCAAGACGTAGAA 941675 Query 107343 GATA-GCTCTTCTCAAGGGTTTTGAGACCAAAGTA 107376 | || | || ||| || || |||| |||||||| Sbjct 941676 GGTATGATC-GCTCGAGAGTCTTGAATCCAAAGTA 941709 >seq12 Length=1765576 Score = 84.2 bits (92), Expect = 3e-11 Identities = 97/129 (75%), Gaps = 4/129 (3%) Strand=Plus/Plus Query 168583 CTTCACCATGGTGGTACGC--AGACTTGTCCGCGACATATGCCGCCAGTTGTGCCACCTT 168640 |||| |||||||| || || ||||||| | | ||||| | || |||| | ||||| Sbjct 787139 CTTCGCCATGGTGATAAGCCGAGACTTGACTG--ACATAACCAGCAAGTTCAACAACCTT 787196 Query 168641 CATTTCATCCTTGAGATTCTTATGGAAGCAAGCATACATCACTTTCCTCTGTGAAGGCTT 168700 ||| |||| |||| || | ||||||||||||||| |||||||||||| ||| || Sbjct 787197 CATATCATTTGTGAGGTTGCGCTTGAAGCAAGCATACATAACTTTCCTCTGTCCAGGTTT 787256 Query 168701 GAGACCATC 168709 |||||| || Sbjct 787257 GAGACCGTC 787265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589978071338800