Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq7 174 2e-38 >seq7 Length=2023280 Score = 174 bits (192), Expect = 2e-38 Identities = 297/421 (71%), Gaps = 15/421 (4%) Strand=Plus/Minus Query 159389 ATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGGCAG 159448 || |||| ||||| || | || || ||||| || ||||||||||| || | ||||||| Sbjct 1815447 ATATATGCTTGATCCCCGTCTCCGCTCATGGTACCAATCCTGCATCGGCTGCTATGGCAG 1815388 Query 159449 GGATGAAAGTTGTAGGTGTCAAGTGTGA--TGATGA-TGGCAACATAGACATCAAAGATC 159505 | ||| ||||| ||| || ||||| | | | ||| || | ||||| ||||| Sbjct 1815387 GTATGCGTGTTGTTACTGTGAAATGTGACATCAAGTCTGGTAATCTTGACATGGCAGATC 1815328 Query 159506 T-AGAGAAGAAAGCAATCATGAATACATTT--GAACTGTCATGTATTATGATTACATATC 159562 | | || | || | | | |||| | ||||| ||||||||| ||||| | Sbjct 1815327 TCAAAGCAAAATG---TGAGAAATATAGCGAGGAACTTGGCGCTATTATGATCACATACC 1815271 Query 159563 CATCTACACATGGTGTATTTGAAACAAACATCA-GACAGATATGTAAGATTGTTCATGAG 159621 || |||| ||| || || ||| || | |||| | | | |||| | ||||||||| || Sbjct 1815270 CAAGTACATTTGGAGTCTTCGAACCAGAGATCAAGGCTGC-ATGTGATATTGTTCATCAG 1815212 Query 159622 AATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAA 159681 |||||||||| |||||| | || || || || | ||||| ||| | || || | Sbjct 1815211 CATGGTGGTCAAGTATATATGGACGGCGCCAACATGAATGCTCAGATCGGATTATGTTCA 1815152 Query 159682 CCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCA 159741 || |||| ||| || |||||||| ||||| || | || |||||||| |||||||| Sbjct 1815151 CCTGGTGAAATTGGCGCCGATGTATGCCATCTTAATCTTCACAAGACATTTTGTATTCCT 1815092 Query 159742 CATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGTAGCAAA--ACATCTCACACCAT 159799 ||||||||||| ||||||||||| ||||| |||||||| |||| ||||| |||||| Sbjct 1815091 CATGGAGGTGGTGGTCCTGGCGTTGGTCCAATTGGTGT--CAAATCTCATCTGGCACCAT 1815034 Query 159800 T 159800 | Sbjct 1815033 T 1815033 Score = 120 bits (132), Expect = 4e-22 Identities = 195/281 (69%), Gaps = 0/281 (0%) Strand=Plus/Minus Query 158422 GACATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCAT 158481 || |||||| | || | | ||| | ||||| |||| | || || || ||||| ||| Sbjct 1816486 GATATTGCTTTTGGAAATGCTCAACGTTTTGGAGTTCCATTTGGTTATGGTGGTCCACAT 1816427 Query 158482 GCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGT 158541 ||||| ||||| || | ||||| || ||||||||||| || || | | | ||| Sbjct 1816426 GCTGCTTTCTTCGCTGTTAGCGACAAATACAAGAGAAAGATTCCAGGACGTCTCATTGGT 1816367 Query 158542 CAGTCAGTAGATAGCGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAG 158601 || ||||| ||| |||||||| ||||| || | || |||||||| ||| Sbjct 1816366 GTATCGAAGGATAGACTAGGGGATAAAGCAATGAGATTGGCGTTGCAAACTAGAGAACAG 1816307 Query 158602 CATATCAGAAGAGACAAAGCAACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAAT 158661 |||||| | ||||| || || || ||||| | ||||| || || ||| | |||| || Sbjct 1816306 CATATCCGCAGAGAAAAGGCTACTAGTAATGTGTGCACGGCTCAGGCATTATTGGCCAAC 1816247 Query 158662 ATGTCTGGGTTCTATGCAGCATATCATGGTGCAGATGGACT 158702 ||| || |||||||||| || ||||| |||| ||||| Sbjct 1816246 ATGAGTGCATTCTATGCAGTCTACCATGGACCAGAAGGACT 1816206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588048480263200