Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq1 168 1e-36 seq15 143 6e-29 seq4 91.5 3e-13 >seq1 Length=3544467 Score = 168 bits (186), Expect = 1e-36 Identities = 162/208 (78%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 ||||| | || | |||||| || |||||||| || ||||| ||||||| ||| || | Sbjct 2378097 AGTCTGAGGACCAAGTGAAGGGTAGACTCTTTCTGGATATTATAATCGGAAAGGGTGCGA 2378156 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 |||||||| || ||||| || ||||| || | || |||||||| |||||||||||||| Sbjct 2378157 CCATCTTCCAGTTGCTTTCCGGCGAAAATCAAACGCTGTTGGTCGGGAGGAATGCCTTCC 2378216 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 ||||||||||| || ||| ||||| || |||||||| ||| ||| || |||||||| Sbjct 2378217 TTGTCTTGAATCTTAGACTTAACGTTGTCGATGGTGTCTGAAGATTCGACCTCAAGGGTG 2378276 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGA 195130 | |||||||| || | ||| || |||| Sbjct 2378277 ATGGTCTTTCCGGTAAGAGTCTTAACGA 2378304 Score = 147 bits (162), Expect = 5e-30 Identities = 147/191 (77%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 194950 TCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAG 195009 || ||||||||||||||||| | ||| ||||| || || || | |||||| ||||| ||| Sbjct 2377668 TCCTTTTGAATATTGTAATCCGAAAGGGTTCTGCCGTCCTCCAACTGCTTTCCTGCAAAG 2377727 Query 195010 ATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTC 195069 || | ||||||||| || || |||||||| || ||||| ||||| ||| || || || Sbjct 2377728 ATCAATCGTTGTTGATCAGGTGGAATGCCCTCCTTGTCCTGAATCTTTGATTTAACATTA 2377787 Query 195070 TCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACG 195129 |||||||| || || ||||||||| | |||| ||||| || ||||| || || || Sbjct 2377788 TCAATGGTATCTGACGATTCCACTTCTAATGTAATTGTCTTGCCAGTCAAGGTCTTGACA 2377847 Query 195130 AACACTTGCAT 195140 || | |||||| Sbjct 2377848 AAGATTTGCAT 2377858 Score = 113 bits (124), Expect = 1e-19 Identities = 147/199 (74%), Gaps = 6/199 (3%) Strand=Plus/Plus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATC-GGCAAGAGTTCT 194981 ||||| | || | ||| ||||||||||| || || || ||||| || |||| || | Sbjct 2378379 AGTCTGAGGACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCACTCAAG-GTGCG 2378437 Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTC 195041 |||||||| || || || || |||||||| | || |||||||| |||||||| || || Sbjct 2378438 ACCATCTTCAAGTTGTTTTCCGGCGAAGATCAAACGCTGTTGGTCGGGAGGAATTCCCTC 2378497 Query 195042 TTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGT--CCGAACTTTCCACTTCAAGG 195099 ||||| || || || ||||||||| || ||||||| | | || || || || ||| Sbjct 2378498 CTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGCTGGAC--TCAACCTCGAGG 2378555 Query 195100 GTAACCGTCTTTCCTGTCA 195118 |||| ||||| || |||| Sbjct 2378556 GTAATGGTCTTACCGGTCA 2378574 >seq15 Length=1659866 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 194929 AAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCT 194988 || || | ||||||||| ||||| ||||| || |||||||||| ||| || | |||||| Sbjct 675677 AACACCAAGTGAAGAGTAGACTCCTTTTGGATGTTGTAATCGGAAAGGGTGCGACCATCT 675618 Query 194989 TCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCT 195048 ||||| ||||| || |||||||| | ||| |||||||| || ||||| || || ||||| Sbjct 675617 TCGAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGGTCGGGTGGAATTCCCTCCTTGTCC 675558 Query 195049 TGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTC 195108 || || || |||||| || || |||||||| ||| || || || ||||| | || Sbjct 675557 TGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATGGTT 675498 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || || | || || ||||| | ||||| Sbjct 675497 TTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 675466 >seq4 Length=2560074 Score = 91.5 bits (100), Expect = 3e-13 Identities = 186/274 (68%), Gaps = 2/274 (1%) Strand=Plus/Minus Query 160589 TTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGTGAAAGACAATGGGGATTGG 160648 ||||||||| | |||| | | ||||| ||||||||| | || || | ||||| |||||| Sbjct 941157 TTCTACGCCTTGTGGATTCCTGATCTATTCATGAAGCGTGTTGAAAAGAATGGAGATTGG 941098 Query 160649 AGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGATGATGTTTATGGTTCCGAGTTCGAG 160708 | || | || ||||| ||| || || | | ||||||||||| ||||||||| Sbjct 941097 ACTCTCATGTGCCCCAACGAATGTCCAGGTTTAGCAGATGTTTATGGCGAGGAGTTCGAG 941038 Query 160709 ACTCTTTATGAAAGATACGAAAAAG-AGGGAAGAGCCAAAAAGGTCGTGAAGGCCCAAGA 160767 |||| || || | |||||||| | ||| ||| | | ||| | ||||| ||| | Sbjct 941037 GCTCTCTACGAGGGTTACGAAAAGGCAGGCAAGGGTC-GCAAGACTATCAAGGCTCAAAA 940979 Query 160768 ACTGTGGCATCACATCCTTGTCGCCCAAGTCGAGGTGGGTATGCCCTTTATCGCATACAA 160827 ||| ||| | ||| |||| || ||| |||| || | || || || ||||| Sbjct 940978 ACTTTGGTACTCCATTCTTGAGGCTCAAACCGAGACCGGAAATCCTTTCATGCTTTACAA 940919 Query 160828 GGATGCCATCTGTCGCAAGAGTAACCAGAAGAAC 160861 |||||| | ||||| ||||| |||||| Sbjct 940918 GGATGCATGCAACAAGAAGAGCAACCAAAAGAAC 940885 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109476340363790