Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq15 104 2e-17 seq1 87.8 1e-12 >seq15 Length=1659866 Score = 104 bits (114), Expect = 2e-17 Identities = 154/216 (71%), Gaps = 8/216 (4%) Strand=Plus/Minus Query 34770 AAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCA 34829 || |||||||||| || || || || ||||| || || |||||| | || |||| Sbjct 675677 AACACCAAGTGAAGAGTAGACTCCTTTTGGATGTTGTAATCGGAAAGGGTGCGACCATCT 675618 Query 34830 TCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34889 || || || |||||||| || || | ||| || ||||| | || | ||||||||||| Sbjct 675617 TCGAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGGTCGGGTGGAATTCCCTCCTTGTCC 675558 Query 34890 CTAATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTAT 34945 ||||| ||||| || | ||||| || | |||||| |||| ||| || Sbjct 675557 TGGATCTTGGACTTGAC--AT--TGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGAT 675502 Query 34946 GGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 |||||| |||||||| ||||| || ||||||||||| Sbjct 675501 GGTTTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 675466 >seq1 Length=3544467 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/214 (70%), Gaps = 8/214 (4%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | |||||||| || ||||| || || ||||||||| ||| | || ||| Sbjct 2377650 ACCAAGTGCAAGGTGCTTTCCTTTTGAATATTGTAATCCGAAAGGGTTCTGCCGTCCTCC 2377709 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 | ||| ||||| ||||| || | |||||| || || | || | ||||||||||| | Sbjct 2377710 AACTGCTTTCCTGCAAAGATCAATCGTTGTTGATCAGGTGGAATGCCCTCCTTGTCCTGA 2377769 Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGT 34948 ||||| ||| || || |||| || || | || || || | || || || Sbjct 2377770 ATCTTTGATTTAAC--AT--TATCAATGGTATCTGACGATTCCACTTCTAATGTAATTGT 2377825 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || | ||||| |||||||| |||||| Sbjct 2377826 CTTGCCAGTCAAGGTCTTGACAAAGATTTGCATA 2377859 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324632136105360