Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq4 167 3e-36 >seq4 Length=2560074 Score = 167 bits (184), Expect = 3e-36 Identities = 516/792 (65%), Gaps = 12/792 (2%) Strand=Plus/Plus Query 47961 ATAGTACCCAAATTTTGATGATTATTNNNNTTGTTACATGCGTCCTTGTAAAGCATAAAA 48020 |||||||||| || | || || | ||||| ||||| |||||||||||||| ||| Sbjct 940874 ATAGTACCCAGGTTCTTTTGGTTGCTCTTCTTGTTGCATGCATCCTTGTAAAGCATGAAA 940933 Query 48021 GGTGTTCCAGTTTCTATCTGAGATTCAATGATAGATTTCCAAACAGTCCTAGCCTTTATA 48080 || |||| || || | |||| |||| || || | ||||| | |||||| ||| Sbjct 940934 GGATTTCCGGTCTCGGTTTGAGCCTCAAGAATGGAGTACCAAAGTTTTTGAGCCTTGATA 940993 Query 48081 ACAGCTCTAGCTTTATTATCATGTTCGTATT--TAGTATATAACTTCTCAAATTCATCCC 48138 | | | || | | |||||| | ||| | | | ||| || || || | Sbjct 940994 GTCTTGCGACCCTTGCCTGCCTTTTCGTAACCCTCGTAGAGAGC--CTCGAACTCCTCGC 941051 Query 48139 CATACACATTATCTAACCCAGGACATTCATTAGGACACATCAATGACCAATCCTCATCAT 48198 |||| |||| |||| || |||||||| || || ||||| | | |||||| ||| | Sbjct 941052 CATAAACATCTGCTAAACCTGGACATTCGTTGGGGCACATGAGAGTCCAATCTCCATTCT 941111 Query 48199 TTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGTTC 48258 ||| || | |||| |||| ||| || ||||| | || || | ||| | | | Sbjct 941112 TTTCAACACGCTTCATGAATAGATCAGGAATCCACAAGGCGTAGAAGAGATCGCGTGCAC 941171 Query 48259 TTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCC 48318 | |||||| |||||| ||| | || ||||| || || | | ||| ||||||| Sbjct 941172 GAACTTCTTCCTTGCCATGATTTTTGCGTAGATCAAGGAACTCAAAAACATCCGCATGCC 941231 Query 48319 ATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATC 48378 |||| || | || | || | |||| || || |||||||| |||||||| | ||||| Sbjct 941232 ATGGCTCAAGGTAAACAGCAAAGGCACCAGGACGCTTATTACCACCTTGATCAACATATC 941291 Query 48379 TGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTC 48438 ||||||| ||||| |||||| | ||| || || || || || || | |||||||| | Sbjct 941292 TGGCAGTGTTGTTGAAAACTCGGAGCATAGGAACGATGCCGTTAGAGTTTCCATTGGTAC 941351 Query 48439 CCGAAATATAACTTCCACTAGCTC---TTATATTACTAATTGAAATACCTATACCACCTG 48495 | | || || ||| |||| | || | | | |||| | ||| |||||||| | Sbjct 941352 CGGCTATGTATGCGCCAGTAGCACGGATTCGGTGAAT-ATTG--AGACCAATACCACCAG 941408 Query 48496 CCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCAT 48555 | | || || || | |||||| || | ||||| ||||| || || ||||| || | Sbjct 941409 CATTCTTTGAGATCATAGCACAAATCTTCAAAGTATCGTAAATACCATCAATACTGTCCT 941468 Query 48556 CTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATA 48615 | |||| | | || || || || | ||| | || ||| || | | || | Sbjct 941469 CCTTCATGTCGATAAGGAAGCATGATGAAAGTTGTGCTTGTGGAGTACCCGCAGAGAAGA 941528 Query 48616 ATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTATATGTTTCAATAACAG 48675 |||||| || ||||| | || | || | ||| | ||| || |||||||| || || Sbjct 941529 GTGTTGGCGAGGCATGTGTGAAGTACTTGTTTGACATCAAGTTGTATGTTTCGATGGCAC 941588 Query 48676 AATCTATATC-CCATTGATGTATACCTATAGATACACGCATTAACATATATTGAGGTCTT 48734 || || || || | || ||||| | | |||||||| | ||| | ||| || | | Sbjct 941589 TTTCAATGTCATCACCG-TGAATACCAACGGCAACACGCATGATCATTTGTTGTGGACGT 941647 Query 48735 TCAACAATTTTG 48746 || ||| |||| Sbjct 941648 TCTGCAACTTTG 941659 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562106200246800