Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq1 134 1e-26 seq12 93.3 3e-14 >seq1 Length=3544467 Score = 134 bits (148), Expect = 1e-26 Identities = 145/192 (76%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 101278 TTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAA 101337 ||| ||||| ||||||||||| | | |||||| | || ||||| ||||| |||||||| Sbjct 2377667 TTCCTTTTGAATATTGTAATCCGAAAGGGTTCTGCCGTCCTCCAACTGCTTTCCTGCAAA 2377726 Query 101338 TATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAAT 101397 ||||| || |||||||| || |||||||| || || || ||||| ||| ||| ||| | Sbjct 2377727 GATCAATCGTTGTTGATCAGGTGGAATGCCCTCCTTGTCCTGAATCTTTGATTTAACATT 2377786 Query 101398 TTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTAC 101457 || | || || |||| ||||||||| | || | || ||||| || || || || || Sbjct 2377787 ATCAATGGTATCTGACGATTCCACTTCTAATGTAATTGTCTTGCCAGTCAAGGTCTTGAC 2377846 Query 101458 AAATATCTGCAT 101469 ||| || ||||| Sbjct 2377847 AAAGATTTGCAT 2377858 Score = 132 bits (146), Expect = 4e-26 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || || ||||||||||| ||||| || ||||| ||||||| | || | |||| ||| Sbjct 2378106 ACCAAGTGAAGGGTAGACTCTTTCTGGATATTATAATCGGAAAGGGTGCGACCATCTTCC 2378165 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | |||||| || || || |||||||||||||| ||||| ||||||||||| || |||||| Sbjct 2378166 AGTTGCTTTCCGGCGAAAATCAAACGCTGTTGGTCGGGAGGAATGCCTTCCTTGTCTTGA 2378225 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || || || || | || | ||||| || | ||| || ||||| |||| || || Sbjct 2378226 ATCTTAGACTTAACGTTGTCGATGGTGTCTGAAGATTCGACCTCAAGGGTGATGGTCTTT 2378285 Query 101441 CCGGTTAAAGTTTTTACAAATAT 101463 ||||| | ||| || || | ||| Sbjct 2378286 CCGGTAAGAGTCTTAACGACTAT 2378308 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || ||||| | || ||||| ||||| || |||||||| | | || | | || || Sbjct 2377878 ACCAAATGTAAAGTCGATTCCTTTTGAATGTTGTAATCCGAAAGTGTACGACCGTCCTCA 2377937 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | ||||||||| ||||| || | ||| ||||||||||| || || || || |||||||| Sbjct 2377938 AGTTGCTTACCAGCAAAGATAAGACGTTGTTGATCGGGTGGGATACCCTCCTTATCTTGG 2377997 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || || || ||| | || | || || || | ||| || || | ||||| || || Sbjct 2377998 ATCTTCGACTTCACATTGTCGATGGTATCCGATGATTCAACCTCCAAAGTGATTGTCTTT 2378057 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| | || || || || |||||||| Sbjct 2378058 CCGGTAAGGGTCTTGACGAAAATCTGCAT 2378086 >seq12 Length=1765576 Score = 93.3 bits (102), Expect = 3e-14 Identities = 119/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 101282 TTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATC 101341 ||||| || |||||||| | || ||| | | || ||||||||||| || || || ||| Sbjct 99194 TTTTGGATGTTGTAATCTGAGAGAGTACGTCCGTCTTCCAATTGCTTTCCAGCGAAGATC 99135 Query 101342 AAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCT 101401 ||||| ||||||||||| ||||| || || || || || || || || ||| | || Sbjct 99134 AAACGTTGTTGATCGGGAGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 99075 Query 101402 ACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 | ||||| || | || || ||||| |||| || ||||| || Sbjct 99074 ATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGT 99031 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396276613032090