Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq1 145 6e-30 seq15 91.5 1e-13 >seq1 Length=3544467 Score = 145 bits (160), Expect = 6e-30 Identities = 163/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | |||||| || | ||||| || ||||||||||||||||| || || ||| Sbjct 2377641 AGACGGAGCACCAAGTGCAAGGTGCTTTCCTTTTGAATATTGTAATCCGAAAGGGTTCTG 2377700 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| ||||||||||| || ||||| |||| ||| |||||||| | |||| ||||||| Sbjct 2377701 CCGTCCTCCAACTGCTTTCCTGCAAAGATCAATCGTTGTTGATCAGGTGGAATGCCCTCC 2377760 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||||| ||| ||| | | | | ||||||| ||||| || | ||| Sbjct 2377761 TTGTCCTGAATCTTTGATTTAACATTATCAATGGTATCTGACGATTCCACTTCTAATGTA 2377820 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || || ||||| || || ||||| || ||||| Sbjct 2377821 ATTGTCTTGCCAGTCAAGGTCTTGACAAAGATTTGCAT 2377858 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 |||||||||| || || |||||||| |||||||| || || | ||| |||| || Sbjct 2377878 ACCAAATGTAAAGTCGATTCCTTTTGAATGTTGTAATCCGAAAGTGTACGACCGTCCTCA 2377937 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | |||||||| ||||| || || || |||||||| | || | |||||||| || Sbjct 2377938 AGTTGCTTACCAGCAAAGATAAGACGTTGTTGATCGGGTGGGATACCCTCCTTATCTTGG 2377997 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 ||||| || ||| | | | || || | || ||||||| || || || ||| Sbjct 2377998 ATCTTCGACTTCACATTGTCGATGGTATCCGATGATTCAACCTCCAAAGTGATTGTCTTT 2378057 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || | || || || ||||||||||| Sbjct 2378058 CCGGTAAGGGTCTTGACGAAAATCTGCAT 2378086 >seq15 Length=1659866 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || |||||||| || || || ||| ||||| || |||||||| || || | ||| Sbjct 675683 AGACGTAACACCAAGTGAAGAGTAGACTCCTTTTGGATGTTGTAATCGGAAAGGGTGCGA 675624 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | ||||| ||||| || |||| ||||||||| || | |||| |||||| Sbjct 675623 CCATCTTCGAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGGTCGGGTGGAATTCCCTCC 675564 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || ||| | | | || || | ||| ||||| | || Sbjct 675563 TTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTG 675504 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || ||||| ||||| | || || || || |||||||| Sbjct 675503 ATGGTTTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 675466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380935882209510