Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq7 123 5e-23 >seq7 Length=2023280 Score = 123 bits (136), Expect = 5e-23 Identities = 348/522 (67%), Gaps = 23/522 (4%) Strand=Plus/Minus Query 47840 TGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCC 47899 ||||| || || ||||| || || || ||||| ||||| || |||| || || |||||| Sbjct 1768567 TGGTAATCACCAACTCTCTTTTCGAAAAAGTTAGTCTTGCCGGCCAAGGAAATATTCTCC 1768508 Query 47900 ATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCAG 47958 |||||| || || |||| | || || || |||| ||||| || || Sbjct 1768507 ATGAAGTCAAATGGATTGGCAGATTTGTAGACTT-TGTCGTTGCCCAAAGCGATGAGGAG 1768449 Query 47959 GTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGA 48018 |||| || ||| | |||||||| | |||||||||| ||||||||||| || | Sbjct 1768448 ACGATCAGCAACGAATTCGATGTACTGCTTCATGAGGGTGGAGTTCATGCCTAGAAGAG- 1768390 Query 48019 CACGGGCAA-AGCCTTTGTGAGAAACTCCTTCTCTATCTGC-ACGGCTTCCCCCACAATC 48076 ||| | || ||||| || | || || | ||| || ||| ||||| || | | Sbjct 1768389 CACAAGGAAGAGCCTCGGTCAAGAATTCTTGCTCGAT-TGCGACGGCCTCGGTGATGACG 1768331 Query 48077 TGCTTAACGCGGGACT-CTGAGGGTTTGTTGCGCAGGTGCTTGGCAT------AGAGCAT 48129 | ||| |||| || | || | || || |||||||| || |||| | Sbjct 1768330 T-CTT------GGACAGCTT--GCTTGGATGGGC-GGTGCTTGAGATGGGAGAAGAGGAG 1768281 Query 48130 GCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAG 48189 ||| || || || |||| | |||||||| ||| |||||| |||| || ||| ||| Sbjct 1768280 GCATGCGAAATCGGTGTGGAGACCTTCGTCACGGGAGATGAGTTCGTTTGAAAAGGTGAG 1768221 Query 48190 ACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAA 48249 || | ||||| || | || ||||||||||| || | ||||| || || ||||| || Sbjct 1768220 TCCGGCCATGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGATCCGGAGAAAAA 1768161 Query 48250 GATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGA 48309 ||| || || || || ||||| ||| || | | | || | | |||||| ||| Sbjct 1768160 GATACCTTCAACGGCAGCGAATGCGACAAGACGTTGAGCAAAGGTGGAGTTCTTATCTTG 1768101 Query 48310 GATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351 ||||| | |||||||| ||||||||||||||||| || Sbjct 1768100 AATCCATTTGACAGCCCAGTCGGCCTTCTTCTTGATGCAAGG 1768059 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931528491660800