Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq1 183 2e-40 seq12 93.3 3e-13 seq2 89.7 3e-12 >seq1 Length=3544467 Score = 183 bits (202), Expect = 2e-40 Identities = 372/548 (68%), Gaps = 6/548 (1%) Strand=Plus/Plus Query 474332 ATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTA 474391 |||||||| ||||| || ||||| ||| |||||||| | | | | ||| || | | Sbjct 2295124 ATTGGTATCGATTTGGGTACTACCTACTCTTGTGTAGGTATCTTTCGTGATGATAGAATC 2295183 Query 474392 GAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAA 474451 ||||| || || || |||||||| || | || |||||||| | ||| | || || || Sbjct 2295184 GAAATTATCGCGAACGACCAAGGAAACCGTACCACACCATCCTTCGTTGCCTTCACAGAT 2295243 Query 474452 ACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACT 474511 || || | ||| || |||||||||||||| |||||| || || || | || ||| Sbjct 2295244 ACCGAGCGTCTGATCGGAGATGCTGCTAAGAATCAAGTCGCCATGAACCCAATCAACACT 2295303 Query 474512 ATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGAT 474571 | || ||||| || | ||||||||||| || |||| ||| | || ||| | ||| Sbjct 2295304 GTCTTCGATGCGAAGCGTTTGATTGGTCGCAAGTTTGCAGATGCTGAAGTTCAAGCCGAT 2295363 Query 474572 ATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAG--CAA 474629 ||| || | || || ||||| || | || || || ||| || || | | Sbjct 2295364 ATGAAGCACTTCCCATTCAAGGTCATTGACCGTGCCGGAAAGCCAGTCATTGAGGTCGAG 2295423 Query 474630 TACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCA 474689 | || | || || | |||||||| |||| ||| |||| ||||| ||| | || | || Sbjct 2295424 TTCAAG--GGAGAGAACAAACAATTCACACCAGAAGAAATCTCTTCCATGATCTTGGTCA 2295481 Query 474690 AAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTACT 474748 | |||| | | ||||| ||| | || || || | || | | || || | || Sbjct 2295482 AGATGAGAGAGACCGCTGAG-GCTTACCTCGGTGGAACTGTCAACAACGCCGTCGTCACA 2295540 Query 474749 GTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCA 474808 || ||||| || || | ||||| ||||||||||| || || || || || ||||| Sbjct 2295541 GTCCCAGCTTACTTCACCGATTCACAACGTCAAGCTACCAAGGACGCTGGTCTCATTGCT 2295600 Query 474809 GGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTT 474868 |||||||| ||| | ||||| || || || || || ||||| || ||||||| ||| | Sbjct 2295601 GGTCTTAACGTTCTCCGTATCATCAACGAGCCTACCGCAGCTGCCATTGCTTACGGTTTG 2295660 Query 474869 GATAAGAA 474876 || ||||| Sbjct 2295661 GACAAGAA 2295668 Score = 111 bits (122), Expect = 1e-18 Identities = 155/218 (71%), Gaps = 12/218 (6%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 |||||| | ||| || | ||||| ||| ||||| | ||||||||| | || || Sbjct 2378093 ACGAAGTCTGAGGACCAAGTGAAGGGTAGACTCTTTCTGGATATTATAATCGGAAAGGGT 2378152 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | |||||| ||||||||||| || ||||| | ||| ||||| || |||||||| || Sbjct 2378153 GCGACCATCTTCCAGTTGCTTTCCGGCGAAAATCAAACGCTGTTGGTCGGGAGGAATGCC 2378212 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTT----- 480725 |||||||||||||||||| || || || || |||| ||||| | Sbjct 2378213 TTCCTTGTCTTGAATCTTAGACTTAACGTTGTCGAT------GGTGTCTGAAGATTCGAC 2378266 Query 480726 -TCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGA 480762 |||||||| || || || ||||| ||||||||||||| Sbjct 2378267 CTCAAGGGTGATGGTCTTTCCGGTAAGAGTCTTAACGA 2378304 Score = 107 bits (118), Expect = 1e-17 Identities = 121/162 (75%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 |||||||||||| || | || | || ||||| || || ||| ||||| | || || Sbjct 2377637 ACGAAGACGGAGCACCAAGTGCAAGGTGCTTTCCTTTTGAATATTGTAATCCGAAAGGGT 2377696 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 |||| || || | |||||||| ||||| || | |||||||||||||| ||||| || Sbjct 2377697 TCTGCCGTCCTCCAACTGCTTTCCTGCAAAGATCAATCGTTGTTGATCAGGTGGAATGCC 2377756 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATC 480712 |||||||| ||||||||| ||| ||| ||||| ||||| Sbjct 2377757 CTCCTTGTCCTGAATCTTTGATTTAACATTATCAATGGTATC 2377798 Score = 98.7 bits (108), Expect = 6e-15 Identities = 115/153 (75%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 480618 TCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTG 480677 || ||||||||||| |||||||| ||||||||||||||||| || || || || ||||| Sbjct 2377932 TCCTCAAGTTGCTTACCAGCAAAGATAAGACGTTGTTGATCGGGTGGGATACCCTCCTTA 2377991 Query 480678 TCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAAT 480736 ||||| ||||| || ||| || || ||||| | || | || | ||| || || Sbjct 2377992 TCTTGGATCTTCGACTTCACATTGTCGATGGTATCCGATGATTCAACCTCCAA-AGTGAT 2378050 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || ||||| || ||||| |||||||| || Sbjct 2378051 TGTCTTTCCGGTAAGGGTCTTGACGAAAATCTG 2378083 >seq12 Length=1765576 Score = 93.3 bits (102), Expect = 3e-13 Identities = 111/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794 |||| || |||| ||||| ||||| || || ||||| ||||||||||| ||||| |||| Sbjct 561380 ATGCCGTCGTTACCGTTCCCGCATACTTCAACGATTCCCAACGTCAAGCTACTAAGGATG 561439 Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCAC 474854 | || |||||| ||| | || ||| | | || | || || ||||| || ||||| | Sbjct 561440 CTGGTCAAATTGCCGGTTTGAACGTTCTCAGAGTTGTCAACGAGCCAACTGCTGCCGCTC 561499 Query 474855 TTGCTTATGGTCTTGATAAGAATTCTGACAA 474885 | ||||| ||| | || ||| || ||||| Sbjct 561500 TCGCTTACGGTTTGGAGAAGGATGAGGACAA 561530 Score = 87.8 bits (96), Expect = 1e-11 Identities = 107/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 480618 TCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTG 480677 ||||| | |||||||||||| || || | |||||||||||| ||||||||||| |||||| Sbjct 99161 TCTTCCAATTGCTTTCCAGCGAAGATCAAACGTTGTTGATCGGGAGGAATTCCCTCCTTG 99102 Query 480678 TCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATA 480737 || || ||||| |||||| || || || || | | |||||||| || Sbjct 99101 TCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATG 99042 Query 480738 GTTTTACCGGTGAGAGTCTTAACGAA 480763 || || || || || ||||| ||||| Sbjct 99041 GTCTTGCCCGTAAGGGTCTTGACGAA 99016 >seq2 Length=3453044 Score = 89.7 bits (98), Expect = 3e-12 Identities = 113/154 (73%), Gaps = 1/154 (1%) Strand=Plus/Plus Query 474717 TTGGACAAGAAG-TAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAA 474775 |||| ||||||| | || | || || || ||||| ||||| || || || || ||| Sbjct 3296516 TTGGGCAAGAAGGTCACAAAAGCCGTCATCACTGTCCCAGCTTACTTCAACGACAACCAA 3296575 Query 474776 CGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAAT 474835 |||||||| || || ||||| || ||| || |||||||| || | ||||| ||||| Sbjct 3296576 CGTCAAGCTACCAAGGATGCTGGTGCAATCGCTGGTCTTAACGTCCTCCGTATCATTAAC 3296635 Query 474836 GAACCAACAGCAGCCGCACTTGCTTATGGTCTTG 474869 || || || || || || ||||||| ||||||| Sbjct 3296636 GAGCCTACCGCTGCTGCCATTGCTTACGGTCTTG 3296669 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268163328904760