Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq7 147 3e-30 >seq7 Length=2023280 Score = 147 bits (162), Expect = 3e-30 Identities = 190/258 (74%), Gaps = 6/258 (2%) Strand=Plus/Plus Query 138162 AATGGTGTGAGATGT--TTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCAT 138219 ||||||| ||||| |||| |||||||| ||||| ||||||||||| |||||||||| Sbjct 1815033 AATGGTGCCAGATGAGATTTG--ACACCAATTGGACCAACGCCAGGACCACCACCTCCAT 1815090 Query 138220 GTGGAATACAGAATGTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTCACATG 138279 | |||||||| |||||||| || | ||| ||||| |||||||| || ||| |||| | Sbjct 1815091 GAGGAATACAAAATGTCTTGTGAAGATTAAGATGGCATACATCGGCGCCAATTTCACCAG 1815150 Query 138280 GTTTTGCTAGACCTACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCAT 138339 || || || | ||| ||||| | || || || || | |||||| |||||||||| Sbjct 1815151 GTGAACATAATCCGATCTGAGCATTCATGTTGGCGCCGTCCATATATACTTGACCACCAT 1815210 Query 138340 TGTCATGAACGATCTTACATATCTGTC-TGATGTTTGTTTCAAATACACCATGAGTCGAT 138398 | |||||| || | |||| | | | |||| | || ||| || || ||| || | Sbjct 1815211 GCTGATGAACAATATCACAT-GCAGCCTTGATCTCTGGTTCGAAGACTCCAAATGTACTT 1815269 Query 138399 GGATATGTAATCATAATA 138416 || ||||| ||||||||| Sbjct 1815270 GGGTATGTGATCATAATA 1815287 Score = 111 bits (122), Expect = 2e-19 Identities = 193/281 (69%), Gaps = 0/281 (0%) Strand=Plus/Plus Query 139260 AGTCCATCTGCACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGT 139319 ||||| |||| ||||| || ||||||||||| || ||| || || | | ||| || Sbjct 1816206 AGTCCTTCTGGTCCATGGTAGACTGCATAGAATGCACTCATGTTGGCCAATAATGCCTGA 1816265 Query 139320 GCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGT 139379 || ||||| | ||||| || || || ||||| | |||||||| ||||||||||| | Sbjct 1816266 GCCGTGCACACATTACTAGTAGCCTTTTCTCTGCGGATATGCTGTTCTCTAGTTTGCAAC 1816325 Query 139380 GCTAATCTGTATGCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGGT 139439 || ||||| ||| || ||| || ||| || ||| | | | || || Sbjct 1816326 GCCAATCTCATTGCTTTATCCCCTAGTCTATCCTTCGATACACCAATGAGACGTCCTGGA 1816385 Query 139440 ATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCCC 139499 ||||||||||| || ||||| | || ||||| |||||||| ||||| || || || Sbjct 1816386 ATCTTTCTCTTGTATTTGTCGCTAACAGCGAAGAAAGCAGCATGTGGACCACCATAACCA 1816445 Query 139500 ATAGGAATACCAAACCTTTGCATACTACCTACAGCAATATC 139540 | |||| ||||| | ||| | | || | ||||||||| Sbjct 1816446 AATGGAACTCCAAAACGTTGAGCATTTCCAAAAGCAATATC 1816486 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578995722132400