Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq15 95.1 2e-14 seq1 95.1 2e-14 >seq15 Length=1659866 Score = 95.1 bits (104), Expect = 2e-14 Identities = 130/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 193179 ATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTC 193238 || || || ||||| | || | | ||| || | ||| |||||||| || || |||| | Sbjct 675647 ATGTTGTAATCGGAAAGGGTGCGACCATCTTCGAGTTGCTTTCCGGCGAAGATCAATCGC 675588 Query 193239 TGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTA 193298 ||||| || || || ||||| || || || || || |||| || | ||| || || Sbjct 675587 TGTTGGTCGGGTGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTG 675528 Query 193299 TCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGC 193358 |||||||||||||| || || || || ||||| || || || || || || || || ||| Sbjct 675527 TCGGAAGACTCAACCTCGAGGGTGATGGTTTTGCCCGTGAGGGTCTTGACGAAGATCTGC 675468 Query 193359 AT 193360 || Sbjct 675467 AT 675466 >seq1 Length=3544467 Score = 95.1 bits (104), Expect = 2e-14 Identities = 166/238 (70%), Gaps = 4/238 (2%) Strand=Plus/Plus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCT--CTTTAGAAATAT 193182 || ||| |||||| | | || || |||| ||||| || || | |||| ||| ||| Sbjct 2377623 ATCTATTGACCACCACGAAGACGGAGCACCAAGTGCAAGGT-GCTTTCCTTTTGAA-TAT 2377680 Query 193183 TATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTT 193242 | || || || | ||||| || || || || ||||| ||||| || |||| |||| Sbjct 2377681 TGTAATCCGAAAGGGTTCTGCCGTCCTCCAACTGCTTTCCTGCAAAGATCAATCGTTGTT 2377740 Query 193243 GATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGG 193302 ||||||| || || || || || || || || || | ||| | ||| ||| ||||| | Sbjct 2377741 GATCAGGTGGAATGCCCTCCTTGTCCTGAATCTTTGATTTAACATTATCAATGGTATCTG 2377800 Query 193303 AAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 | || || ||||||| || || || || || || | || || ||||| |||||||| Sbjct 2377801 ACGATTCCACTTCTAATGTAATTGTCTTGCCAGTCAAGGTCTTGACAAAGATTTGCAT 2377858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899650239098400