Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017-
05-31] 370 sequences; 44,096,448 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq15 95.1 2e-14
seq1 95.1 2e-14
>seq15
Length=1659866
Score = 95.1 bits (104), Expect = 2e-14
Identities = 130/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 193179 ATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTC 193238
|| || || ||||| | || | | ||| || | ||| |||||||| || || |||| |
Sbjct 675647 ATGTTGTAATCGGAAAGGGTGCGACCATCTTCGAGTTGCTTTCCGGCGAAGATCAATCGC 675588
Query 193239 TGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTA 193298
||||| || || || ||||| || || || || || |||| || | ||| || ||
Sbjct 675587 TGTTGGTCGGGTGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTG 675528
Query 193299 TCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGC 193358
|||||||||||||| || || || || ||||| || || || || || || || || |||
Sbjct 675527 TCGGAAGACTCAACCTCGAGGGTGATGGTTTTGCCCGTGAGGGTCTTGACGAAGATCTGC 675468
Query 193359 AT 193360
||
Sbjct 675467 AT 675466
>seq1
Length=3544467
Score = 95.1 bits (104), Expect = 2e-14
Identities = 166/238 (70%), Gaps = 4/238 (2%)
Strand=Plus/Plus
Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCT--CTTTAGAAATAT 193182
|| ||| |||||| | | || || |||| ||||| || || | |||| ||| |||
Sbjct 2377623 ATCTATTGACCACCACGAAGACGGAGCACCAAGTGCAAGGT-GCTTTCCTTTTGAA-TAT 2377680
Query 193183 TATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTT 193242
| || || || | ||||| || || || || ||||| ||||| || |||| ||||
Sbjct 2377681 TGTAATCCGAAAGGGTTCTGCCGTCCTCCAACTGCTTTCCTGCAAAGATCAATCGTTGTT 2377740
Query 193243 GATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGG 193302
||||||| || || || || || || || || || | ||| | ||| ||| ||||| |
Sbjct 2377741 GATCAGGTGGAATGCCCTCCTTGTCCTGAATCTTTGATTTAACATTATCAATGGTATCTG 2377800
Query 193303 AAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
| || || ||||||| || || || || || || | || || ||||| ||||||||
Sbjct 2377801 ACGATTCCACTTCTAATGTAATTGTCTTGCCAGTCAAGGTCTTGACAAAGATTTGCAT 2377858
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899650239098400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |