Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017-
05-31] 370 sequences; 44,096,448 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq1 109 8e-19
>seq1
Length=3544467
Score = 109 bits (120), Expect = 8e-19
Identities = 139/190 (73%), Gaps = 1/190 (1%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| ||| | || || |||||||| || || |||||||||||||| ||| ||
Sbjct 2377858 ATGCAAATCTTTGTCAAGACCTTGACTGGCAAGACAATTACATTAGAAGTGGAATCGTCA 2377799
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| ||| || || ||| || || || || || || ||||| || || || |||
Sbjct 2377798 GATACCATTGATAATGTTAAATCAAAGATTCAGGACAAGGAGGGCATTCCACCTGATCAA 2377739
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||| ||||||| | ||| || |||||| | || || |||||| | || ||||| |||
Sbjct 2377738 CAACGATTGATCTTTGCAGGAAAGCAGTTGGAGGACGGCAGAACCCTTTCGGATTACAAT 2377679
Query 156003 ATATCCAAAG 156012
|| || ||||
Sbjct 2377678 AT-TCAAAAG 2377670
Score = 87.8 bits (96), Expect = 3e-12
Identities = 137/196 (70%), Gaps = 0/196 (0%)
Strand=Plus/Minus
Query 155836 TTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATTTTAA 155895
|||| || | || ||||| || || || | || |||||| ||| || | || |
Sbjct 2378301 TTAAGACTCTTACCGGAAAGACCATCACCCTTGAGGTCGAATCTTCAGACACCATCGACA 2378242
Query 155896 ACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTGATTT 155955
|||| || ||| || ||||| || |||||||| ||||| || ||||| | |||||||
Sbjct 2378241 ACGTTAAGTCTAAGATTCAAGACAAGGAAGGCATTCCTCCCGACCAACAGCGTTTGATTT 2378182
Query 155956 ATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAAGAGG 156015
||||| ||||| || |||||| | || | || ||||||||||| ||||||
Sbjct 2378181 TCGCCGGAAAGCAACTGGAAGATGGTCGCACCCTTTCCGATTATAATATCCAGAAAGAGT 2378122
Query 156016 CGACGCTTCATTTAGT 156031
| || ||||| || ||
Sbjct 2378121 CTACCCTTCACTTGGT 2378106
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731868615092000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |