Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq1 109 8e-19 >seq1 Length=3544467 Score = 109 bits (120), Expect = 8e-19 Identities = 139/190 (73%), Gaps = 1/190 (1%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| ||| | || || |||||||| || || |||||||||||||| ||| || Sbjct 2377858 ATGCAAATCTTTGTCAAGACCTTGACTGGCAAGACAATTACATTAGAAGTGGAATCGTCA 2377799 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| || || ||| || || || || || || ||||| || || || ||| Sbjct 2377798 GATACCATTGATAATGTTAAATCAAAGATTCAGGACAAGGAGGGCATTCCACCTGATCAA 2377739 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||| ||||||| | ||| || |||||| | || || |||||| | || ||||| ||| Sbjct 2377738 CAACGATTGATCTTTGCAGGAAAGCAGTTGGAGGACGGCAGAACCCTTTCGGATTACAAT 2377679 Query 156003 ATATCCAAAG 156012 || || |||| Sbjct 2377678 AT-TCAAAAG 2377670 Score = 87.8 bits (96), Expect = 3e-12 Identities = 137/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 155836 TTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATTTTAA 155895 |||| || | || ||||| || || || | || |||||| ||| || | || | Sbjct 2378301 TTAAGACTCTTACCGGAAAGACCATCACCCTTGAGGTCGAATCTTCAGACACCATCGACA 2378242 Query 155896 ACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTGATTT 155955 |||| || ||| || ||||| || |||||||| ||||| || ||||| | ||||||| Sbjct 2378241 ACGTTAAGTCTAAGATTCAAGACAAGGAAGGCATTCCTCCCGACCAACAGCGTTTGATTT 2378182 Query 155956 ATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAAGAGG 156015 ||||| ||||| || |||||| | || | || ||||||||||| |||||| Sbjct 2378181 TCGCCGGAAAGCAACTGGAAGATGGTCGCACCCTTTCCGATTATAATATCCAGAAAGAGT 2378122 Query 156016 CGACGCTTCATTTAGT 156031 | || ||||| || || Sbjct 2378121 CTACCCTTCACTTGGT 2378106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731868615092000