Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq1 125 1e-23 >seq1 Length=3544467 Score = 125 bits (138), Expect = 1e-23 Identities = 168/230 (73%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCT--CTTTAGAGATATTATAATCA 192366 |||||| | |||||| | || || || || || || | |||| || ||||| ||||| Sbjct 2377631 ACCACCACGAAGACGGAGCACCAAGTGCAAGGT-GCTTTCCTTTTGA-ATATTGTAATCC 2377688 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | |||| | || ||||| || || || |||||||| |||| |||||||||||| Sbjct 2377689 GAAAGGGTTCTGCCGTCCTCCAACTGCTTTCCTGCAAAGATCAATCGTTGTTGATCAGGT 2377748 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || || || || || || || ||| |||||| || | |||||||||||| Sbjct 2377749 GGAATGCCCTCCTTGTCCTGAATCTTTGATTTAACATTATCAATGGTATCTGACGATTCC 2377808 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||||| ||||| || || ||||| || || || | ||| || ||||| Sbjct 2377809 ACTTCTAATGTAATTGTCTTGCCAGTCAAGGTCTTGACAAAGATTTGCAT 2377858 Score = 104 bits (114), Expect = 5e-17 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCT-CTTTAGAGATATTATAATC 192365 |||||||| | ||||| | || ||||||||||| | | |||| || || || ||||| Sbjct 2377857 ATACCACCACGGAGACGAAGGACCAAATGTAAAGTCGATTCCTTTTGA-ATGTTGTAATC 2377915 Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425 || | ||| || | || || | ||| |||||||||||||| | | |||||||| || Sbjct 2377916 CGAAAGTGTACGACCGTCCTCAAGTTGCTTACCAGCAAAGATAAGACGTTGTTGATCGGG 2377975 Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485 ||| || || || |||||||| || || || ||||| || | ||| || ||||| Sbjct 2377976 TGGGATACCCTCCTTATCTTGGATCTTCGACTTCACATTGTCGATGGTATCCGATGATTC 2378035 Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || | ||| || || || || || | || || | || |||||||| Sbjct 2378036 AACCTCCAAAGTGATTGTCTTTCCGGTAAGGGTCTTGACGAAAATCTGCAT 2378086 Score = 89.7 bits (98), Expect = 1e-12 Identities = 150/217 (69%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | ||| | | || || || | |||| |||||| |||||||||||| Sbjct 2378085 ATACCACCACGAAGTCTGAGGACCAAGTGAAGGGTAGACTCTTTCTGGATATTATAATCG 2378144 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || || |||| |||| ||| || || || || || || | |||||| || || Sbjct 2378145 GAAAGGGTGCGACCATCTTCCAGTTGCTTTCCGGCGAAAATCAAACGCTGTTGGTCGGGA 2378204 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| || ||||| || ||| || || || || | ||||| ||||| Sbjct 2378205 GGAATGCCTTCCTTGTCTTGAATCTTAGACTTAACGTTGTCGATGGTGTCTGAAGATTCG 2378264 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAA 192523 || || || || ||||| || || || | || |||| Sbjct 2378265 ACCTCAAGGGTGATGGTCTTTCCGGTAAGAGTCTTAA 2378301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984475332949500