Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq1 113 8e-20 >seq1 Length=3544467 Score = 113 bits (124), Expect = 8e-20 Identities = 165/230 (72%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCT--CTTTAGAAATATTATAATCT 171899 |||||| | ||| || | || || || || || || | |||| ||| |||| ||||| Sbjct 2377631 ACCACCACGAAGACGGAGCACCAAGTGCAAGGT-GCTTTCCTTTTGAA-TATTGTAATCC 2377688 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | || |||| ||||| || || || ||||| || |||| ||||| |||||| Sbjct 2377689 GAAAGGGTTCTGCCGTCCTCCAACTGCTTTCCTGCAAAGATCAATCGTTGTTGATCAGGT 2377748 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || || || || || || || || ||| |||||| || |||||||||||||| Sbjct 2377749 GGAATGCCCTCCTTGTCCTGAATCTTTGATTTAACATTATCAATGGTATCTGACGATTCC 2377808 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||||| ||||| || || ||||| || || || | || || ||||| Sbjct 2377809 ACTTCTAATGTAATTGTCTTGCCAGTCAAGGTCTTGACAAAGATTTGCAT 2377858 Score = 98.7 bits (108), Expect = 2e-15 Identities = 156/224 (70%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | ||||| | || || || | |||| |||||| ||||||||||| Sbjct 2378085 ATACCACCACGAAGTCTGAGGACCAAGTGAAGGGTAGACTCTTTCTGGATATTATAATCG 2378144 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | || | || |||| ||| || || || ||||| || | ||||||||| || Sbjct 2378145 GAAAGGGTGCGACCATCTTCCAGTTGCTTTCCGGCGAAAATCAAACGCTGTTGGTCGGGA 2378204 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| || ||||| || ||| || || || || || ||||| ||||| Sbjct 2378205 GGAATGCCTTCCTTGTCTTGAATCTTAGACTTAACGTTGTCGATGGTGTCTGAAGATTCG 2378264 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATAT 172063 || || || || ||||| || || || | || |||| || ||| Sbjct 2378265 ACCTCAAGGGTGATGGTCTTTCCGGTAAGAGTCTTAACGACTAT 2378308 Score = 95.1 bits (104), Expect = 2e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | || || | || ||||||||||| | || || ||| || ||||| Sbjct 2377857 ATACCACCACGGAGACGAAGGACCAAATGTAAAGTCGATTCCTTTTGAATGTTGTAATCC 2377916 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | || |||| || | ||| ||||||||||| || | | ||||| || ||| Sbjct 2377917 GAAAGTGTACGACCGTCCTCAAGTTGCTTACCAGCAAAGATAAGACGTTGTTGATCGGGT 2377976 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || || || |||||||| || || || ||||| || ||||| || ||||| Sbjct 2377977 GGGATACCCTCCTTATCTTGGATCTTCGACTTCACATTGTCGATGGTATCCGATGATTCA 2378036 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || | ||| || || || || || | || || | ||| |||||||| Sbjct 2378037 ACCTCCAAAGTGATTGTCTTTCCGGTAAGGGTCTTGACGAAAATCTGCAT 2378086 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905131813746000