Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq11 138 3e-27 seq4 134 4e-26 seq1 107 6e-18 >seq11 Length=1849165 Score = 138 bits (152), Expect = 3e-27 Identities = 390/591 (66%), Gaps = 20/591 (3%) Strand=Plus/Minus Query 251407 ATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGA 251466 ||||| || || | | ||| | ||| || ||| | ||||| || | ||| |||| | Sbjct 1435004 ATAAGCCCGCAAATGTCACAGATATGAACTCTGAAGGCATCCGAAACCTCAAATAGTCTC 1434945 Query 251467 CCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAA 251526 |||| ||| | ||||||||| ||||||||||||||||| ||||| || |||||| Sbjct 1434944 TCCTTCAAGAAAGCACTTGCACCGTGCGAAATCATACAATCACGTTCCATCTCTCCGAAA 1434885 Query 251527 CGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGA 251586 || ||||||||||| | || | ||| ||| ||||||| | || || | | ||| Sbjct 1434884 CGGAGACCACCATCTCTGGCACGACCTTCGACAGGCTGTCTGGTTAGGATCTGAACGGGA 1434825 Query 251587 CCGATGGAGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCG 251646 || ||| ||| ||| |||||||| |||||||| | ||| ||||| ||| | Sbjct 1434824 CCTCTGGCACGGGCATGGATCTTATCATCGACCATATGGCGCAAACGTTGGTAATATGTG 1434765 Query 251647 GGACCGATGAAGA--TGCTCGAAGGCATTTGCTCTCCAGTTAGAGCGTTATACATAACTT 251704 || || | ||||| || | | ||| | ||||| || | | ||||| | | Sbjct 1434764 GGGCCAAGGAAGACTTGGGCCA--TCATCTTACGGCCAGTATGACCATGGTACATGATCT 1434707 Query 251705 CGTTTCCATTAGATTCATAACCAAGT---TTCTGTAGCTCTGAAGCAATATCACCAATCT 251761 | || ||| | |||||| || |||||| ||| | ||| || Sbjct 1434706 CAAAACCGCGAGAGTGGTAACCATGTGCACGGAGTAGCTTGGAAACTGAATCGACA---G 1434650 Query 251762 TGAATTTGCTAAAACTGGTG--CCGTCTCCGTAAAGACCCATTTGAATCAACACTTTGCC 251819 ||| | | |||| ||||| | || || | |||||| || | | || || | Sbjct 1434649 TGACCTCGGTAAA--TGGTGTAGCATCGCCCTCAAGACCACGCAGAGTAGAAACCTTACT 1434592 Query 251820 TAAAAGTGTCTCTTTCAGTTGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGAT 251879 || | ||| ||| ||||| || ||||||||| ||||| || || |||||||| Sbjct 1434591 CAATTGACACTCGATCAAATGGGCAATTGTCATACGAGATGGAATGGCGTGAGGATTGAT 1434532 Query 251880 GATGATGTCGGGTTTCAGTCCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATA-ATGT 251938 ||||| ||||| | ||| || |||||| |||||||||| || | ||| |||| Sbjct 1434531 GATGAGATCGGGAACAACTCCCTCTCTAGTGAACGGCATATCCTGTTGC---ATATATGT 1434475 Query 251939 --TTCCAATAGTTCCCTTTTGTCCGTGACGAGAACTGAACTTATCACCAAT 251987 | || || |||||||||||||||||||| ||| || || |||||||| Sbjct 1434474 AATACCTATGGTTCCCTTTTGTCCGTGACGTGAAGCAAATTTGTCACCAAT 1434424 >seq4 Length=2560074 Score = 134 bits (148), Expect = 4e-26 Identities = 411/629 (65%), Gaps = 15/629 (2%) Strand=Plus/Plus Query 155910 ACACGCTCCATAAATACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGAC 155969 ||||||| ||| |||| |||| ||| | || ||||| || || | ||| Sbjct 941117 ACACGCTTCATGAATAGATCAGGAATCCACAAGGCGTAGAAGAGATCGCGTGCACGAACT 941176 Query 155970 TCCTCATCGCCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGC 156029 || || | ||| ||||| || ||||| || | ||| || || ||| | ||| |||| Sbjct 941177 TCTTCCTTGCCATGATTTTTGCGTAGATCAAGGAACTCAAAAACATCCGCATGCCATGGC 941236 Query 156030 TCCAGATACATAGCAAAACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCA 156086 || || || | |||||| |||| | ||| ||||| ||||| ||||| | ||| Sbjct 941237 TCAAGGTAAACAGCAAAGGCACCAGGACGCTTATTACCACCTTGATCAACATATCTGGCA 941296 Query 156087 GTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGA 156146 || || ||||| || | |||||||||| || || || || | |||||||| ||| Sbjct 941297 GTGTTGTTGAAAACTCGGAGCATAGGAACGATGCCGTTAGAGTTTCCATTGGTACCGGCT 941356 Query 156147 AT--ATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCAT- 156203 || ||||| |||| | || | ||||||| || ||||||||||| | ||| Sbjct 941357 ATGTATGCG--CCAGTAGCACGGATTCGGTGAATATTGAGACCAATACCACC--AGCATT 941412 Query 156204 -TTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTC 156262 || || || ||| || ||| | ||||| | ||||||| |||||| || || | Sbjct 941413 CTTTGAGATCATAGCACAAATCTTCAAAGTATCGTAAATACCATCAATACTGTCCTCCTT 941472 Query 156263 CA--TTGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGT 156320 || | |||| || |||| || | ||| | | |||| || || || ||| ||| Sbjct 941473 CATGTCGATA--AGGAAGCATGATGAAAGTTGTGCTTGTGGAGTACCCGCAGAGAAGAGT 941530 Query 156321 GTAGGTGTTGCATGAATAAAATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTC 156380 || || | ||||| | || ||||| || ||||| | | |||||| || | | Sbjct 941531 GTTGGCGAGGCATGTGTGAAGTACTTGTTTGACATCAAGTTGTATGTTTCGATGGCACTT 941590 Query 156381 TCAAGATTAGACCCGTGAATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCT 156440 |||| | | |||||||||| | | || | ||| ||| || || ||||| ||| Sbjct 941591 TCAATGTCATCACCGTGAATACCAACGGCAACACGCATGATCATTTGTTGTGGACGTTCT 941650 Query 156441 ACAATCACTCCATCAATTCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATAA 156500 ||| ||||||| || |||||||||| || || ||||| || || || || || Sbjct 941651 GCAACTTTGCCATCAAGACGTAGAAGGTATGATCGCTCGAGAGTCTTGAATCCAAAGTAT 941710 Query 156501 TCAAACAGAAAATCACGGTTGTAATCAAT 156529 | | | ||||| |||| ||| |||| Sbjct 941711 TGATAGTTGAAATCTCGGTCGTAGACAAT 941739 >seq1 Length=3544467 Score = 107 bits (118), Expect = 6e-18 Identities = 253/380 (67%), Gaps = 9/380 (2%) Strand=Plus/Plus Query 288850 CTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCT 288909 |||||||| | ||||| || | | ||| ||| | || || | ||| || || | Sbjct 1515333 CTATCAAAACGACCAGGGCGCATGAGTGCCTTGTCAAGTACGTCAGGTCTATTAGTACCA 1515392 Query 288910 GCCAATACAACAATAGATTCGGTTTGCTTAAATCCATCCATACTTGTTAAAATTTGATTA 288969 || | |||||||| || || || || |||||||| || | ||||||||| Sbjct 1515393 GCGAGAACAACAATTTGCTCCGTCGTGTTGAACCCATCCATCTCAGTCAGAATTTGATTG 1515452 Query 288970 AGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAA---TCGCTCCttttt 289026 || || ||| | |||||| ||| ||| |||| ||||| | || | Sbjct 1515453 AGCGTAGCTTCACGTTCATCGTTTCCACCA----AATC--CCGAAGACTTGCCACGAGAC 1515506 Query 289027 ttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATT 289086 || || | |||||| || || |||||||| || | ||| |||| | | | ||| || || Sbjct 1515507 TTTCCGATAGCATCGATCTCATCAATGAATATAATACATGGAGTACTCTTTCTTGCCATG 1515566 Query 289087 GCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAA 289146 ||||| | |||| || | ||||| |||| |||||| |||| |||||||| |||||| Sbjct 1515567 GCAAAAAGATCTCGGACTCTCGATGCACCAACGCCAACAAACATCTCTACAAACTCAGAA 1515626 Query 289147 GCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTC 289206 | || || ||||| ||| | |||||| ||| |||| | || || | ||| Sbjct 1515627 CCACTGACGCTAAAGAATGGTACTCCAGATTCGCCAGCTGTTGCCTTTGCTAGCAATGTT 1515686 Query 289207 TTACCTGTTCCAGGTGGTCC 289226 ||||| || ||||||||||| Sbjct 1515687 TTACCAGTACCAGGTGGTCC 1515706 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471810622664690