Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq1 120 4e-21 seq7 107 2e-17 >seq1 Length=3544467 Score = 120 bits (132), Expect = 4e-21 Identities = 92/109 (84%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || |||||||| || ||||||||| | || || ||| |||| |||||| | || |||||| Sbjct 1826671 GCTGCCAACTATCTTGACATCAAGGCCCTTCTTGATGTTGGATGCAAGACGGTTGCCAAC 1826612 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCA 1592294 ||||||||||| ||||| || |||||||||||||| ||||| ||||||| Sbjct 1826611 ATGATCAAGGGAAAGTCCCCAGAGGAGATCCGCAAAACCTTCAACATCA 1826563 >seq7 Length=2023280 Score = 107 bits (118), Expect = 2e-17 Identities = 142/194 (73%), Gaps = 5/194 (3%) Strand=Plus/Minus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||||||||| || ||| | |||||| ||||| ||| |||| |||||| || ||||| Sbjct 1768259 ACCTTCGTCACGGGAGATGAGTTCGTTTGAAAAGGTGAGTCCGGCCATGAGACCACGCTT 1768200 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 ||||||||| ||||| | | ||| || ||||||||||| || || ||||| || || Sbjct 1768199 CTTGAGCCAGAAGATAGAGGCGAAGGATCCGGAGAAAAAGATACCTTCAACGGCAGCGAA 1768140 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCT-CCTTGTTGATCCACTTCATCGCCC 869357 ||| || || | ||||||||| ||| | | |||| ||||| || | |||| Sbjct 1768139 TGCGACAAGACGTTGAGCAAAGGTG--GAGTTCTTATCTTG--AATCCATTTGACAGCCC 1768084 Query 869358 AGTCGGCCTTTTTC 869371 |||||||||| ||| Sbjct 1768083 AGTCGGCCTTCTTC 1768070 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107108836067290