Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq4 136 4e-27 seq15 127 2e-24 seq1 118 1e-21 seq12 95.1 1e-14 >seq4 Length=2560074 Score = 136 bits (150), Expect = 4e-27 Identities = 1100/1753 (63%), Gaps = 70/1753 (4%) Strand=Plus/Plus Query 138286 ATGTTAAACGATTGACTCTGATCGATGAAAGCGCCTCGATCAATGGCCATGTTAATTAAA 138345 ||||| | |||||| ||||||||||| || || |||||| ||||| | || || Sbjct 940010 ATGTTCATTGATTGAGATTGATCGATGAATGCACCACGATCAGCAGCCATTTGAAC--AA 940067 Query 138346 TTTTTACTTTTCA--TCTCCCACACGGTCTTGTATAGATCACGAATATGTC-GCGGTATT 138402 || || || | | ||||| || |||||||| ||| | || ||| || | | | Sbjct 940068 TTGTTCGTTGAGAGATTTCCCAAACAGTCTTGTAAAGAGCCTTGAT--GTCAGCTGGAAT 940125 Query 138403 GTTGCA-ATATTTTGAATGCTCCCGTTGGCCGCAATGATGCGATTTCTCATGTCATCGTT 138461 ||| |||||||||||| || | |||||||| || || |||| | || Sbjct 940126 ATTGGGGATATTTTGAATGGATCCACCATCAGCAATGATACGGTTCTTCATATTGTCAGA 940185 Query 138462 GTACAGATTCAACTTGATCAAGTCGTTTATCAGATATCTGTTTATGACCTGAAATTCACC 138521 | ||| || | || | ||| || | || || ||| | ||| || ||||| || Sbjct 940186 CCAGAGACCCATATCGACAAGGTCCTTGAGAAGCCATGGGTTAACGACTTGGAATTCTCC 940245 Query 138522 GGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAACGATTCGTTGTTTCC 138581 ||| | || |||||| ||| ||||| ||| ||||||| || |||||||| || Sbjct 940246 GGCAAGAACACGACGAGAGTAGATGTTTGAAGTGTAAGGCTCGAAACATTCGTTGAAGCC 940305 Query 138582 CAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGAGAATTCCGTAAACC 138641 ||||| || | ||| | || || ||||| || || | ||||| || || | || Sbjct 940306 AAGAATTTGGGATGTGCTAGCAGTAGGCATAGGTGCAACTAGGAGAGAGTTGCGGATTCC 940365 Query 138642 GTGAAGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCACAAATCGCTAGGTTTTTTGTT 138701 ||| ||||||| || ||| | || ||| ||||||||||| ||||| | Sbjct 940366 GTGTTGCTTGATGGATTGCTTCAAAGAGTCCCAATCCCACAAATCAGTAGGTGTAACCCC 940425 Query 138702 CCACATATCGTACTGTAACATTCCC----AAACTTGCGGGACTGCCTTCGTACGAATCGT 138757 |||||||||||| || | ||| | ||| | ||| ||||| || | |||| Sbjct 940426 CCACATATCGTATTGAAGTTCACCCTTAGAGACTGG--GGA--GCCTTGATAGGTTTCGT 940481 Query 138758 ATACACCAAACTCTTGCGCCAACTCGTTGCTCGCC-TCGAGCGCACCATAGTAAATAGTT 138816 || |||| || | || | |||| | | || || ||| | | ||| || || Sbjct 940482 ATGGGCCAAGTTCCTTTGCGATCTCGACGGAAGAGGTCAAG-GCAGCGTGGTAGATGGTC 940540 Query 138817 TCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTACGGCATGCGGAGCATC 138876 ||| ||| || ||||| | ||| || | | || | || | || || | Sbjct 940541 TCGAAAATTTGTATGTTGAGGTGTTTGGCTTCTGGGGAGTCAAATGGAAGACGAAGAGCC 940600 Query 138877 GTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGATGGCGCAGATTTGAC 138936 ||| || || || || ||||| || || || ||| ||| ||||| || | ||| Sbjct 940601 AAGAAAGCATCAGCAAGACCTTGAACACCGACCGCGATAGGTCGATGACGGAAATT---- 940656 Query 138937 GCTTTTGCGG----CTTCGATAGGATAATAGTTTACATCGATGATTTTGTTTAAATTTCG 138992 |||||| ||| || ||| ||||| ||||| | || || || || || || |||| Sbjct 940657 GCTTTTTCGGGCCTCTGCGACTGGATAGTAGTTGATGTCAATAATCTTATTCAAGTTTCT 940716 Query 138993 CACGACCACCTTAGTCGTATGCTTTAATCGTTCA-AAATCGTATGTGCCCCCGTTGTCGT 139051 || || || || | | | | || | || ||||| || || ||| | || || Sbjct 940717 AACAACAAC-TTGGACAACCTCGTGAAGCTTTTGGAAATCATAAGTTCCCTCATTCATGT 940775 Query 139052 CGACGACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTGCACACCGCCACTTCGT 139111 ||||| || ||| | | | | | || || | ||| || || || || | Sbjct 940776 TGACGA--------AAGTTGGTAAAGCGA-TGGAAGCCAAGTTACAGCAAGCAACCTCAT 940826 Query 139112 CGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACTTGATCGTACCTAAAT 139171 | || | ||| ||||| ||||| | |||||||| | || ||||| | | Sbjct 940827 CTGGTGCAGAGTACTCGACGATTTCCGTGCACAAATTGGAGCTGCGAATAGTACCCAGGT 940886 Query 139172 TTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTT 139231 | | ||| ||||| || ||| || ||||| ||||||||||| | || | || || | Sbjct 940887 TCTTTTGGTTGCTCTTCTTGTTGCATGCATCCTTGTAAAGCATGAAAGGATTTCCGGTCT 940946 Query 139232 CCACTTGTGTCTCTATAATGAATTTGAACAAGTCCCT-AGC-TTG-TATT-TGACGCACG 139287 | ||| | ||| | |||| | | | |||| | ||| ||| || | | || | Sbjct 940947 CGGTTTGAGCCTCAAGAATGGAGTACCA-AAGTTTTTGAGCCTTGATAGTCTTGCGACCC 941005 Query 139288 TAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGAATCGTTCACCGTAGGCGTCA 139347 | | | | ||||| |||||||| | ||||| || || || | || Sbjct 941006 TTGCCTGCCTTT---TCGTAACCCTCGTAGAGAGCCTCGAACTCCTCGCCATAAACATCT 941062 Query 139348 GAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGC 139407 | | | | |||| | || || |||||||| | ||| | || ||| | || ||| Sbjct 941063 GCTAAACCTGGACATTCGTTGGGGCACATGAGAGTCCAATCTCCATTCTTTTCAACACGC 941122 Query 139408 CTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATCGCGCGCCTTCTTATCTTCC 139467 ||||||| ||||| ||||||||||| ||| | | | |||||| || |||||| Sbjct 941123 TTCATGAATAGATCAGGAATCCACAAGGCGTAGAAGAGATCGCGTGCACGAACTTCTTCC 941182 Query 139468 GAACCCATG----TTACGTTTCATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTC 139523 || ||| || ||| | | |||||| |||||||| || || |||||||| || Sbjct 941183 TTGCC-ATGATTTTTGCGT---AGATCAAGGAACTCAAAAACATCCGCATGCCATGGCTC 941238 Query 139524 CAGATAGATGGCCATTGCGCCTTTCCGTTTG---CCACCTTGATCGACGTGTCGTACAGC 139580 || || | || | || || || || ||||||||||| || | || ||| Sbjct 941239 AAGGTAAACAGCAAAGGCACCAGGACGCTTATTACCACCTTGATCAACATATCTGGCAGT 941298 Query 139581 ATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGT----GCTAC 139636 || ||||| || || | ||| || | | ||| | | |||| ||||| |||| Sbjct 941299 GTTGTTGAAAACTCGGAGCATAGGAACGATGCCGTTAGAGTTTCCATTGGTACCGGCTAT 941358 Query 139637 GGATGGGACTGTTGCGAGCTCGGACGTCATGTACATTGATGCCGATTCCGCCGCCAAATT 139696 | ||| | | || ||| |||| || | ||||| || || || || || | Sbjct 941359 GTATGCGCCAGT----AGCACGGATTCGGTGAATATTGAGACCAATACCACCAGCATTCT 941414 Query 139697 TGGATATTAAAACGCAATCGCGTAATGTCTCGTATATACCTCTTATGCTGTCGTCCTGCA 139756 | || || | | | ||| || || ||||| ||||| || ||||| |||| || Sbjct 941415 TTGAGATCATAGCACAAATCTTCAAAGTATCGTAAATACCATCAATACTGTCCTCCTTCA 941474 Query 139757 TCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAG 139816 | || || |||||||| |||||||| | | || || || || | || || || | Sbjct 941475 TGTCGATAAGGAAGCATGATGAAAGTTGTGCTTGTGGAGTACCCGCAGAGAAGAGTGTTG 941534 Query 139817 GACTCGCGTGCGTGAAC-ATTTGTTTCGACATCAATTCGTACGTTTCGATGGCGCTCACA 139875 | || || ||||| | |||||| |||||||| | ||| ||||||||||| || || Sbjct 941535 GCGAGGCATGTGTGAAGTACTTGTTT-GACATCAAGTTGTATGTTTCGATGGCACTTTCA 941593 Query 139876 ATATCCCTTCCGTGGATACCGACAGAGACTCGCATCAGCATATGTTGGATCCGTTCGGCC 139935 || || ||||| ||||| || | || ||||| | ||| ||||| ||||| || Sbjct 941594 ATGTCATCACCGTGAATACCAACGGCAACACGCATGATCATTTGTTGTGGACGTTCTGCA 941653 Query 139936 ACCGCGCCCTCGAtttttttCAG--ATAACCGTTCTCTAGGGTCTTGTAGCCAAAGTACC 139993 || ||| || | | || || | || ||| || |||||| | |||||||| Sbjct 941654 ACTTTGCCATCAAGACGTAGAAGGTATGATCG--CTCGAGAGTCTTGAATCCAAAGTATT 941711 Query 139994 TATAGTTGAAATC 140006 |||||||||||| Sbjct 941712 GATAGTTGAAATC 941724 >seq15 Length=1659866 Score = 127 bits (140), Expect = 2e-24 Identities = 157/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || ||||| || || ||||| || || | || Sbjct 675466 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAAACCATCACCCTCGAGGTTGAGTCTTCC 675525 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || ||||| || ||||| ||| Sbjct 675526 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCACCCGACCAA 675585 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || |||||||| ||||| || || || || ||| | | | | || ||||| ||| Sbjct 675586 CAGCGATTGATCTTCGCCGGAAAGCAACTCGAAGATGGTCGCACCCTTTCCGATTACAAC 675645 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 || |||||||| || || || ||||||||||| || Sbjct 675646 ATCCAAAAGGAGTCTACTCTTCACTTGGTGTTACG 675680 >seq1 Length=3544467 Score = 118 bits (130), Expect = 1e-21 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| | || || | || || || || ||||| | ||||| ||| | | Sbjct 2377858 ATGCAAATCTTTGTCAAGACCTTGACTGGCAAGACAATTACATTAGAAGTGGAATCGTCA 2377799 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || ||| |||||| || ||||| || || || || || |||||| Sbjct 2377798 GATACCATTGATAATGTTAAATCAAAGATTCAGGACAAGGAGGGCATTCCACCTGATCAA 2377739 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||||| ||||||||||| || || ||| ||||||| |||| | | || ||||| || Sbjct 2377738 CAACGATTGATCTTTGCAGGAAAGCAGTTGGAGGACGGCAGAACCCTTTCGGATTACAAT 2377679 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913 |||||||||||| || | ||||||||| Sbjct 2377678 ATTCAAAAGGAAAGCACCTTGCACTTGGTG 2377649 Score = 118 bits (130), Expect = 1e-21 Identities = 137/185 (74%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 24728 ACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAA 24787 |||||||| || ||||| ||||| || || ||| |||||| | || | || || Sbjct 2378572 ACCGGTAAGACCATTACCCTCGAGGTTGAGTCCAGCGACACCATCGACAACGTCAAGTCC 2378513 Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 |||||||| ||||| || ||||| |||||||| ||||| ||||||||||| ||||| ||| Sbjct 2378512 AAGATCCAGGACAAGGAGGGAATTCCTCCCGACCAACAGCGTTTGATCTTCGCCGGAAAA 2378453 Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907 || || || ||| | | | || || || ||||| || ||||| || || || ||| Sbjct 2378452 CAACTTGAAGATGGTCGCACCTTGAGTGACTACAACATCCAGAAGGAGTCCACTCTCCAC 2378393 Query 24908 TTGGT 24912 ||||| Sbjct 2378392 TTGGT 2378388 Score = 109 bits (120), Expect = 5e-19 Identities = 153/211 (73%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || || || ||||| || || || || | || || ||| | | Sbjct 2378086 ATGCAGATTTTCGTCAAGACCCTTACCGGAAAGACAATCACTTTGGAGGTTGAATCATCG 2378027 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || ||||||||||| || || || || || ||||||||| Sbjct 2378026 GATACCATCGACAATGTGAAGTCGAAGATCCAAGATAAGGAGGGTATCCCACCCGATCAA 2377967 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA--TTCGAGAAACATGTCAGATTATA 24881 |||||| | |||||||| || || || || ||||| ||| | || | || ||||| | Sbjct 2377966 CAACGTCTTATCTTTGCTGGTAAGCAACTTGAGGACGGTCG-TACAC-TTTCGGATTACA 2377909 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGT 24912 ||||||||||||||||||| |||| ||||| Sbjct 2377908 ACATTCAAAAGGAATCGACTTTACATTTGGT 2377878 >seq12 Length=1765576 Score = 95.1 bits (104), Expect = 1e-14 Identities = 126/175 (72%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACG 24778 || || || || || || || || || || || || || || ||||||| | || | Sbjct 99022 AAGACCCTTACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACCATCGACAAT 99081 Query 24779 GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTT 24838 || || |||||||| ||||| || ||||| |||||||||||||||||||||||||| Sbjct 99082 GTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCTCCCGATCAACAACGTTTGATCTTC 99141 Query 24839 GCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGG 24893 || || || || |||| || | | | |||||||| ||||| ||||||| Sbjct 99142 GCTGGAAAGCAATTGGAAGACGGACGTACTCTCTCAGATTACAACATCCAAAAGG 99196 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449895519223600