Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq7 87.8 3e-11 >seq7 Length=2023280 Score = 87.8 bits (96), Expect = 3e-11 Identities = 138/195 (71%), Gaps = 7/195 (4%) Strand=Plus/Minus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 ||||||||| || ||| | |||||| |||| ||| |||| |||||| || ||||| Sbjct 1768259 ACCTTCGTCACGGGAGATGAGTTCGTTTGAAAAGGTGAGTCCGGCCATGAGACCACGCTT 1768200 Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459 ||||||||| ||||| | ||| || ||||||||||| || || ||||| || || Sbjct 1768199 CTTGAGCCAGAAGATAGAGGCGAAGGATCCGGAGAAAAAGATACCTTCAACGGCAGCGAA 1768140 Query 794460 GCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTT-TGTTG-ATCCACTTCATCGCC 794517 |||| || || | ||||| || || |||| | ||| ||||| || | ||| Sbjct 1768139 TGCGACAAGACGTTGAGCAAAGGT-----GGAGTTCTTATCTTGAATCCATTTGACAGCC 1768085 Query 794518 CACTCTGCCTTTTTC 794532 || || ||||| ||| Sbjct 1768084 CAGTCGGCCTTCTTC 1768070 Score = 86.0 bits (94), Expect = 1e-10 Identities = 152/218 (70%), Gaps = 8/218 (4%) Strand=Plus/Minus Query 793926 TCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGCC 793985 ||||||||||| |||||||| | | || || |||||| | || || ||||| Sbjct 1768546 TCGAAAAAGTTAGTCTTGCCGGCCAAGGAAATATTCTCCATGAAGTCAAATGGATTGGCA 1768487 Query 793986 GTCAGGTAGTGCTTCTCGCACCCGA--GCGACGCAAGCAGGCGGTCGGCGACGAATTCAA 794043 | |||| || ||| || | |||| | || || || || || |||||||| | Sbjct 1768486 GATTTGTAGACTTTGTCGTTGCCCAAAGCGATG--AGGAGACGATCAGCAACGAATTCGA 1768429 Query 794044 TGTACTGGCACATGAGGGCGGCGTTCATGCC--GATGAGCGCCACGGGCAGCGACTCGCT 794101 ||||||| |||||||| || ||||||||| || |||| | | || || | |||| | Sbjct 1768428 TGTACTGCTTCATGAGGGTGGAGTTCATGCCTAGAAGAGCACAA--GGAAGAGCCTCGGT 1768371 Query 794102 GACAAACTCTTTCTCGATCTCGACGGCCTCGATGATGA 794139 | || |||| |||||| ||||||||||| |||||| Sbjct 1768370 CAAGAATTCTTGCTCGATTGCGACGGCCTCGGTGATGA 1768333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916207041412430