Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq15 125 5e-24 seq1 105 4e-18 seq12 91.5 1e-13 >seq15 Length=1659866 Score = 125 bits (138), Expect = 5e-24 Identities = 158/215 (73%), Gaps = 8/215 (4%) Strand=Plus/Minus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 |||| ||||| || |||||| || ||||| || || || ||| |||| |||| || Sbjct 675674 ACCAAGTGAAGAGTAGACTCCTTTTGGATGTTGTAATCGGAAAGGGTGCGACCATCTTCG 675615 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 |||||||||||||||||||||| ||| || ||||| | || | ||||||||||| | Sbjct 675614 AGTTGCTTTCCGGCGAAGATCAATCGCTGTTGGTCGGGTGGAATTCCCTCCTTGTCCTGG 675555 Query 34889 ATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGT 34944 || || ||||| || | ||||| || | ||| || || | ||| ||||| Sbjct 675554 ATCTTGGACTTGAC--AT--TGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATGGT 675499 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGA 34979 || |||||||||||||| || ||||||||||||| Sbjct 675498 TTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGA 675464 >seq1 Length=3544467 Score = 105 bits (116), Expect = 4e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822 || ||||||| ||||| ||| ||| ||||| || ||||| || || ||| |||| || Sbjct 2378100 CTGAGGACCAAGTGAAGGGTAGACTCTTTCTGGATATTATAATCGGAAAGGGTGCGACCA 2378159 Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882 || |||||||||||||||||||| |||| || || ||||| | || | || |||||| Sbjct 2378160 TCTTCCAGTTGCTTTCCGGCGAAAATCAAACGCTGTTGGTCGGGAGGAATGCCTTCCTTG 2378219 Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATG 34942 || | || || || ||| | || | || | ||||| |||| ||| ||| Sbjct 2378220 TCTTGAATCTTAGACTTAACGTTGTCGATGGTGTCTGAAGATTCGACCTCAAGGGTGATG 2378279 Query 34943 GTCTTTCCCGTGAGGGTCTTTAC 34965 |||||||| || || ||||| || Sbjct 2378280 GTCTTTCCGGTAAGAGTCTTAAC 2378302 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822 || ||||||| ||| | ||| ||||||||| ||||| ||||| | | |||| || Sbjct 2378382 CTGAGGACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCACTCAAGGTGCGACCA 2378441 Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882 || || ||||| |||||||||||||||| || || ||||| | || | ||||||||| Sbjct 2378442 TCTTCAAGTTGTTTTCCGGCGAAGATCAAACGCTGTTGGTCGGGAGGAATTCCCTCCTTG 2378501 Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATG 34942 || | || || |||||| | || | || ||| ||| || || | ||| ||| Sbjct 2378502 TCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGCTGGACTCAACCTCGAGGGTAATG 2378561 Query 34943 GTCTTTCCCGT 34953 ||||| || || Sbjct 2378562 GTCTTACCGGT 2378572 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/216 (70%), Gaps = 8/216 (4%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | |||||| ||||| ||||| || || ||||| ||| | | | || Sbjct 2377647 AGCACCAAGTGCAAGGTGCTTTCCTTTTGAATATTGTAATCCGAAAGGGTTCTGCCGTCC 2377706 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| |||||||| || ||||||| |||||| || || | || | ||||||||||| Sbjct 2377707 TCCAACTGCTTTCCTGCAAAGATCAATCGTTGTTGATCAGGTGGAATGCCCTCCTTGTCC 2377766 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || ||| ||| || || |||| || || | || || || | || || Sbjct 2377767 TGAATCTTTGATTTAAC--AT--TATCAATGGTATCTGACGATTCCACTTCTAATGTAAT 2377822 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| || || | |||||| |||||||| ||||| Sbjct 2377823 TGTCTTGCCAGTCAAGGTCTTGACAAAGATTTGCAT 2377858 >seq12 Length=1765576 Score = 91.5 bits (100), Expect = 1e-13 Identities = 133/186 (72%), Gaps = 8/186 (4%) Strand=Plus/Minus Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847 |||| || ||||| || || || || | || | || |||| ||||||||| ||||||| Sbjct 99196 CCTTTTGGATGTTGTAATCTGAGAGAGTACGTCCGTCTTCCAATTGCTTTCCAGCGAAGA 99137 Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907 ||| ||||| || || | || | ||||||||||| | || || ||||| || Sbjct 99136 TCAAACGTTGTTGATCGGGAGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGAC--AT- 99080 Query 34908 CTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTT 34963 | ||||| || || |||||| |||| ||| |||||||| ||||| |||||||| Sbjct 99079 -TGTCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTG 99021 Query 34964 ACAAAG 34969 || ||| Sbjct 99020 ACGAAG 99015 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325691331329030