Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq1 91.5 2e-13 >seq1 Length=3544467 Score = 91.5 bits (100), Expect = 2e-13 Identities = 147/209 (70%), Gaps = 2/209 (1%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAA-CATAAC 146090 |||| || ||| | || || | || ||||| ||||| ||| | || || ||| ||| Sbjct 2378085 TGCAGATTTTCGTCAAGACCCTTACCGGAAAGACAATCACTTTGGAGGTTGAATCATCG- 2378027 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 ||||| || | ||||| || || || ||| ||| || || || |||||||||||| Sbjct 2378026 GATACCATCGACAATGTGAAGTCGAAGATCCAAGATAAGGAGGGTATCCCACCCGATCAA 2377967 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 ||| | || || ||||| ||||| ||| | || || | | || | | ||||| || Sbjct 2377966 CAACGTCTTATCTTTGCTGGTAAGCAACTTGAGGACGGTCGTACACTTTCGGATTACAAC 2377907 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGT 146239 || ||||| ||||||||| | ||||| || Sbjct 2377906 ATTCAAAAGGAATCGACTTTACATTTGGT 2377878 Score = 87.8 bits (96), Expect = 3e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAA-CATAAC 146090 ||||||| || | || || || || || || |||||||| | || || ||| | | | Sbjct 2377857 TGCAAATCTTTGTCAAGACCTTGACTGGCAAGACAATTACATTAGAAGTGGAATCGTCA- 2377799 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 ||||| ||| | ||||| ||| || || || || || ||||||||||| |||||| Sbjct 2377798 GATACCATTGATAATGTTAAATCAAAGATTCAGGACAAGGAGGGCATTCCACCTGATCAA 2377739 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 ||| || | || |||||||| || || || || || ||||| | | ||||| ||| Sbjct 2377738 CAACGATTGATCTTTGCAGGAAAGCAGTTGGAGGACGGCAGAACCCTTTCGGATTACAAT 2377679 Query 146211 ATACAAAAAGAA 146222 || ||||| ||| Sbjct 2377678 ATTCAAAAGGAA 2377667 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786162763980400