Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq1 143 5e-29 >seq1 Length=3544467 Score = 143 bits (158), Expect = 5e-29 Identities = 169/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||| || || || || | ||| ||||| || || || || ||||| | Sbjct 2377858 TACCACCACGGAGACGAAGGACCAAATGTAAAGTCGATTCCTTTTGAATGTTGTAATCCG 2377917 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | || | | |||||| || ||||| || ||||||||||| || | ||||||||| || | Sbjct 2377918 AAAGTGTACGACCGTCCTCAAGTTGCTTACCAGCAAAGATAAGACGTTGTTGATCGGGTG 2377977 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || ||||||||||| ||||| | || ||||| || || ||||| | ||| | Sbjct 2377978 GGATACCCTCCTTATCTTGGATCTTCGACTTCACATTGTCGATGGTATCCGATGATTCAA 2378037 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | |||||||| || ||||| || || | ||||| || || |||||||| Sbjct 2378038 CCTCCAAAGTGATTGTCTTTCCGGTAAGGGTCTTGACGAAAATCTGCAT 2378086 Score = 120 bits (132), Expect = 6e-22 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658 || || ||||| || ||||| |||||||| ||||||||||| || || | | ||| ||| Sbjct 2378103 AGGACCAAGTGAAGGGTAGACTCTTTCTGGATATTATAATCGGAAAGGGTGCGACCATCT 2378162 Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718 || ||||| ||||| || || || | | ||||| || ||||| || |||||||| ||| Sbjct 2378163 TCCAGTTGCTTTCCGGCGAAAATCAAACGCTGTTGGTCGGGAGGAATGCCTTCCTTGTCT 2378222 Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTC 82778 |||||||| | || || || || || || || || ||| || || | || || ||| Sbjct 2378223 TGAATCTTAGACTTAACGTTGTCGATGGTGTCTGAAGATTCGACCTCAAGGGTGATGGTC 2378282 Query 82779 TTGCCTGTCAACGTCTTTACAAATAT 82804 || || || | ||||| || | ||| Sbjct 2378283 TTTCCGGTAAGAGTCTTAACGACTAT 2378308 Score = 86.0 bits (94), Expect = 1e-11 Identities = 133/190 (70%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658 || || ||||| ||||| || || ||||| || || || ||| | | | ||| ||| Sbjct 2378385 AGGACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCACTCAAGGTGCGACCATCT 2378444 Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718 || ||||||||||| || ||||| | | ||||| || ||||| ||||| ||||| || Sbjct 2378445 TCAAGTTGTTTTCCGGCGAAGATCAAACGCTGTTGGTCGGGAGGAATTCCCTCCTTGTCC 2378504 Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTC 82778 || ||||| | || || || || || || || | | || || || | || || ||| Sbjct 2378505 TGGATCTTGGACTTGACGTTGTCGATGGTGTCGCTGGACTCAACCTCGAGGGTAATGGTC 2378564 Query 82779 TTGCCTGTCA 82788 || || |||| Sbjct 2378565 TTACCGGTCA 2378574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981822545525430