Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq1 100 3e-16 >seq1 Length=3544467 Score = 100 bits (110), Expect = 3e-16 Identities = 142/197 (72%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||| ||||||||||| ||||| |||||| | ||| ||| | || || || Sbjct 2378109 AAGTGAAGGGTAGACTCTTTCTGGATATTATAATCGGAAAGGGTGCGACCA-TCTTCCAG 2378167 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||| || ||| |||| | ||||| ||||||||||| |||||||||||||| || Sbjct 2378168 TTGCTTTCCGGCGAAAATCAAACGCTGTTGGTCGGGAGGAATGCCTTCCTTGTCTTGAAT 2378227 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||| | | || | ||||| | | || || || | ||||| ||| || || Sbjct 2378228 CTTAGACTTAACGTTGTCGATGGTGTCTGAAGATTCGACCTCAAGGGTGATGGTCTTTCC 2378287 Query 133634 GGTCAGAGTTTTTACGA 133650 ||| ||||| || |||| Sbjct 2378288 GGTAAGAGTCTTAACGA 2378304 Score = 95.1 bits (104), Expect = 1e-14 Identities = 128/176 (73%), Gaps = 2/176 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||| ||||| || ||||| || | || ||| ||| | || || || || || || Sbjct 2378400 GTGGACTCCTTCTGGATGTTGTAGTCACTCAAGGTGCGACCA-TCTTCAAGTTGTTTTCC 2378458 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | ||||| ||||||||||| || || |||||||| |||||| ||| Sbjct 2378459 GGCGAAGATCAAACGCTGTTGGTCGGGAGGAATTCCCTCCTTGTCCTGGATCTTGGACTT 2378518 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCA 133638 || | || | |||||| ||| ||| || |||| ||| | ||| || ||||||| Sbjct 2378519 GACGTTGTCGATGGTGTCGCTGGACTCAACCTCGAGGGTAATGGTCTTACCGGTCA 2378574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483418564178800