Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq4 194 4e-44 seq7 102 2e-16 >seq4 Length=2560074 Score = 194 bits (214), Expect = 4e-44 Identities = 518/782 (66%), Gaps = 11/782 (1%) Strand=Plus/Minus Query 110304 TATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATT 110363 || ||||| ||||| ||||| || || | || | || ||| | ||||| | | Sbjct 941709 TACTTTGGATTCAAGACTCTCGAGCGATCATACCTTCTACGTCTTGATGGCAAAGTTGCA 941650 Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423 |||||||| ||||| ||| | | |||||||| |||||||||| || |||| ||| || Sbjct 941649 GAACGTCCACAACAAATGATCATGCGTGTTGCCGTTGGTATTCACGGTGATGACATTGAA 941590 Query 110424 GCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCTATTCATGCTACTCCTACC 110483 || || ||| || | | | || ||| | | ||||| | || || Sbjct 941589 AGTGCCATCGAAACATACAACTTGATGTCAAACAAGTACTTCACACATGCCTCGCCAACA 941530 Query 110484 CTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGAATTAAC 110543 || || || || ||| || |||| | | || ||||| ||| | | || || Sbjct 941529 CTCTTCTCTGCGGGTACTCCACAAGCACAACTTTCATCATGCTTCCTTATCGACATGAAG 941470 Query 110544 GATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAAC-TGCTCTTATTTCTAAAAA 110602 || || |||||| |||||||| ||| || || |||| |||| | || || || || Sbjct 941469 GAGGACAGTATTGATGGTATTTACGATACT-TTGAAGATTTGTGCTATGATCTCAAAGAA 941411 Query 110603 CTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCAAC 110662 |||| || |||||| | | |||| || || | | || ||| | || || Sbjct 941410 TGCTGGTGGTATTGGTCTCAATATTCACCGAATCCGTGCTACTGGCGCATACATAGCCGG 941351 Query 110663 AGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAA 110722 | || || || | || | ||||| ||| | |||| |||||| ||||||| | Sbjct 941350 TACCAATGGAAACTCTAACGGCATCGTTCCTATGCTCCGAGTTTTCAACAACACTGCCAG 941291 Query 110723 ATATGTGAATCAAGGTGG---TAAGAGAAATGGCTCATTTGCTATCTATCTCGAACCTTG 110779 |||||| |||||||||| |||| | ||| | |||||| | || || || || || Sbjct 941290 ATATGTTGATCAAGGTGGTAATAAGCGTCCTGGTGCCTTTGCTGTTTACCTTGAGCCATG 941231 Query 110780 GCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAG 110839 |||| | ||| | ||||| ||| | || || || |||||||| || |||||| | Sbjct 941230 GCATGCGGATGTTTTTGAGTTCCTTGATCTACGCAAAAATCATGGCAAGGAAGAAGTTCG 941171 Query 110840 AGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAGA 110899 ||||| ||| | || || || |||||||| | ||| |||||||||| |||||| || | Sbjct 941170 TGCACGCGATCTCTTCTACGCCTTGTGGATTCCTGATCTATTCATGAAGCGTGTTGAAAA 941111 Query 110900 AAATGGCATGTGGTCTCTTATGTGTCCTCATCG-TTCTCCTGGTCTATCTGATGTATATG 110958 ||||| ||| |||| ||||| || || || | ||| ||| || | ||||| |||| Sbjct 941110 GAATGGAGATTGGACTCTCATGTG-CCCCAACGAATGTCCAGGTTTAGCAGATGTTTATG 941052 Query 110959 GAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCGCAA-ACAA 111017 | | ||||| || | || ||||| || ||||| | ||||||| |||||| || | Sbjct 941051 GCGAGGAGTTCGAGGCTCTCTACGAGGGTTACGAAAAGGCAGGCAAGGGTCGCAAGACTA 940992 Query 111018 ATTCCA-GCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACTCC 111076 || | |||||| ||||||||| | || ||||| | ||| || || |||| ||| Sbjct 940991 --TCAAGGCTCAAAAACTTTGGTACTCCATTCTTGAGGCTCAAACCGAGACCGGAAATCC 940934 Query 111077 TT 111078 || Sbjct 940933 TT 940932 >seq7 Length=2023280 Score = 102 bits (112), Expect = 2e-16 Identities = 143/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 131787 TTCCTGCAATTAAAAAGAAAGCAGAATGGGCTATTAAATGGATTCAAGATGATTCCGCTA 131846 ||||| || || ||||| || || |||||| | ||||||||||||||| | | | | Sbjct 1768057 TTCCTTGCATCAAGAAGAAGGCCGACTGGGCTGTCAAATGGATTCAAGATAAGAACTCCA 1768116 Query 131847 ATTTTTCTACAAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTT 131906 ||| || | | ||||| || || ||| ||||||||||| || || || || | | Sbjct 1768117 CCTTTGCTCAACGTCTTGTCGCATTCGCTGCCGTTGAAGGTATCTTTTTCTCCGGATCCT 1768176 Query 131907 TCTGTGCTATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATC 131966 || ||||||| ||||| ||||||||||| | ||| | |||||| | || || || Sbjct 1768177 TCGCCTCTATCTTCTGGCTCAAGAAGCGTGGTCTCATGGCCGGACTCACCTTTTCAAACG 1768236 Query 131967 AATTCATCTCGAGAGATGAAG 131987 || ||||||| | || |||| Sbjct 1768237 AACTCATCTCCCGTGACGAAG 1768257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186807173765570