Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017-
05-31] 370 sequences; 44,096,448 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq4 194 4e-44
seq7 102 2e-16
>seq4
Length=2560074
Score = 194 bits (214), Expect = 4e-44
Identities = 518/782 (66%), Gaps = 11/782 (1%)
Strand=Plus/Minus
Query 110304 TATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATT 110363
|| ||||| ||||| ||||| || || | || | || ||| | ||||| | |
Sbjct 941709 TACTTTGGATTCAAGACTCTCGAGCGATCATACCTTCTACGTCTTGATGGCAAAGTTGCA 941650
Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423
|||||||| ||||| ||| | | |||||||| |||||||||| || |||| ||| ||
Sbjct 941649 GAACGTCCACAACAAATGATCATGCGTGTTGCCGTTGGTATTCACGGTGATGACATTGAA 941590
Query 110424 GCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCTATTCATGCTACTCCTACC 110483
|| || ||| || | | | || ||| | | ||||| | || ||
Sbjct 941589 AGTGCCATCGAAACATACAACTTGATGTCAAACAAGTACTTCACACATGCCTCGCCAACA 941530
Query 110484 CTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGAATTAAC 110543
|| || || || ||| || |||| | | || ||||| ||| | | || ||
Sbjct 941529 CTCTTCTCTGCGGGTACTCCACAAGCACAACTTTCATCATGCTTCCTTATCGACATGAAG 941470
Query 110544 GATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAAC-TGCTCTTATTTCTAAAAA 110602
|| || |||||| |||||||| ||| || || |||| |||| | || || || ||
Sbjct 941469 GAGGACAGTATTGATGGTATTTACGATACT-TTGAAGATTTGTGCTATGATCTCAAAGAA 941411
Query 110603 CTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCAAC 110662
|||| || |||||| | | |||| || || | | || ||| | || ||
Sbjct 941410 TGCTGGTGGTATTGGTCTCAATATTCACCGAATCCGTGCTACTGGCGCATACATAGCCGG 941351
Query 110663 AGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAA 110722
| || || || | || | ||||| ||| | |||| |||||| ||||||| |
Sbjct 941350 TACCAATGGAAACTCTAACGGCATCGTTCCTATGCTCCGAGTTTTCAACAACACTGCCAG 941291
Query 110723 ATATGTGAATCAAGGTGG---TAAGAGAAATGGCTCATTTGCTATCTATCTCGAACCTTG 110779
|||||| |||||||||| |||| | ||| | |||||| | || || || || ||
Sbjct 941290 ATATGTTGATCAAGGTGGTAATAAGCGTCCTGGTGCCTTTGCTGTTTACCTTGAGCCATG 941231
Query 110780 GCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAG 110839
|||| | ||| | ||||| ||| | || || || |||||||| || |||||| |
Sbjct 941230 GCATGCGGATGTTTTTGAGTTCCTTGATCTACGCAAAAATCATGGCAAGGAAGAAGTTCG 941171
Query 110840 AGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAGA 110899
||||| ||| | || || || |||||||| | ||| |||||||||| |||||| || |
Sbjct 941170 TGCACGCGATCTCTTCTACGCCTTGTGGATTCCTGATCTATTCATGAAGCGTGTTGAAAA 941111
Query 110900 AAATGGCATGTGGTCTCTTATGTGTCCTCATCG-TTCTCCTGGTCTATCTGATGTATATG 110958
||||| ||| |||| ||||| || || || | ||| ||| || | ||||| ||||
Sbjct 941110 GAATGGAGATTGGACTCTCATGTG-CCCCAACGAATGTCCAGGTTTAGCAGATGTTTATG 941052
Query 110959 GAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCGCAA-ACAA 111017
| | ||||| || | || ||||| || ||||| | ||||||| |||||| || |
Sbjct 941051 GCGAGGAGTTCGAGGCTCTCTACGAGGGTTACGAAAAGGCAGGCAAGGGTCGCAAGACTA 940992
Query 111018 ATTCCA-GCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACTCC 111076
|| | |||||| ||||||||| | || ||||| | ||| || || |||| |||
Sbjct 940991 --TCAAGGCTCAAAAACTTTGGTACTCCATTCTTGAGGCTCAAACCGAGACCGGAAATCC 940934
Query 111077 TT 111078
||
Sbjct 940933 TT 940932
>seq7
Length=2023280
Score = 102 bits (112), Expect = 2e-16
Identities = 143/201 (71%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 131787 TTCCTGCAATTAAAAAGAAAGCAGAATGGGCTATTAAATGGATTCAAGATGATTCCGCTA 131846
||||| || || ||||| || || |||||| | ||||||||||||||| | | | |
Sbjct 1768057 TTCCTTGCATCAAGAAGAAGGCCGACTGGGCTGTCAAATGGATTCAAGATAAGAACTCCA 1768116
Query 131847 ATTTTTCTACAAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTT 131906
||| || | | ||||| || || ||| ||||||||||| || || || || | |
Sbjct 1768117 CCTTTGCTCAACGTCTTGTCGCATTCGCTGCCGTTGAAGGTATCTTTTTCTCCGGATCCT 1768176
Query 131907 TCTGTGCTATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATC 131966
|| ||||||| ||||| ||||||||||| | ||| | |||||| | || || ||
Sbjct 1768177 TCGCCTCTATCTTCTGGCTCAAGAAGCGTGGTCTCATGGCCGGACTCACCTTTTCAAACG 1768236
Query 131967 AATTCATCTCGAGAGATGAAG 131987
|| ||||||| | || ||||
Sbjct 1768237 AACTCATCTCCCGTGACGAAG 1768257
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186807173765570
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |