Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq1 111 4e-19 seq15 107 5e-18 >seq1 Length=3544467 Score = 111 bits (122), Expect = 4e-19 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || ||||| || ||||| | || || ||| ||| ||||| |||| Sbjct 2378299 AAGACTCTTACCGGAAAGACCATCACCCTTGAGGTCGAATCTTCAGACACCATCGACAAC 2378240 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||||||||| || ||||| ||| || ||| || | | || ||| Sbjct 2378239 GTTAAGTCTAAGATTCAAGACAAGGAAGGCATTCCTCCCGACCAACAGCGTTTGATTTTC 2378180 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||||||||| |||||||||| | || | ||||||| || |||||||||||||| Sbjct 2378179 GCCGGAAAGCAACTGGAAGATGGTCGCACCCTTTCCGATTATAATATCCAGAAAGAGTCT 2378120 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390 || |||||| | || | |||||||| Sbjct 2378119 ACCCTTCACTTGGTCCTCAGACTTCG 2378094 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 |||||||| | || | |||||| |||||||||||||||| |||||| || | | || Sbjct 2378094 CGAAGTCTGAGGACCAAGTGAAGGGTAGACTCTTTCTGGATATTATAATCGGAAAGGGTG 2378153 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 | ||||||||||| |||||||||||||| || | || ||||| Sbjct 2378154 CGACCATCTTCCAGTTGCTTTCCGGCGAAAATCAAACGCTGTTG 2378197 >seq15 Length=1659866 Score = 107 bits (118), Expect = 5e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || ||||| || ||||| ||||| | || || || ||| ||| Sbjct 675469 CAGATCTTCGTCAAGACCCTCACGGGCAAAACCATCACCCTCGAGGTTGAGTCTTCCGAC 675528 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||| || || || || |||||| || ||| || Sbjct 675529 ACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCACCCGACCAACAG 675588 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || | ||||||||||||||||| | |||||||| | || | ||||||||||| || Sbjct 675589 CGATTGATCTTCGCCGGAAAGCAACTCGAAGATGGTCGCACCCTTTCCGATTACAACATC 675648 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTT 206381 || || ||||||||||||||| | || || Sbjct 675649 CAAAAGGAGTCTACTCTTCACTTGGTGTT 675677 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181815197430770