Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq1 107 2e-18 >seq1 Length=3544467 Score = 107 bits (118), Expect = 2e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || || || || || || || || || ||| || |||| || || || || || Sbjct 2378111 GTGAAGGGTAGACTCTTTCTGGATATTATAATCGGAAAGGGTGCGACCATCTTCCAGTTG 2378170 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 || || || |||||||||||||| || ||||| || |||||||| || |||||||| || Sbjct 2378171 CTTTCCGGCGAAAATCAAACGCTGTTGGTCGGGAGGAATGCCTTCCTTGTCTTGAATCTT 2378230 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 || || ||| | ||||| || ||||| || || || || ||||| || ||||| Sbjct 2378231 AGACTTAACGTTGTCGATGGTGTCTGAAGATTCGACCTCAAGGGTGATGGTCTTTCCGGT 2378290 Query 134690 TAAAGTTTTAACGA 134703 | ||| ||||||| Sbjct 2378291 AAGAGTCTTAACGA 2378304 Score = 104 bits (114), Expect = 2e-17 Identities = 131/180 (73%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || ||||| ||||| || ||||||||||| | | |||| || || || || || Sbjct 2378393 GTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCACTCAAGGTGCGACCATCTTCAAGTTG 2378452 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 ||| || || || ||||||||||| || ||||| || || || || || || || || || Sbjct 2378453 TTTTCCGGCGAAGATCAAACGCTGTTGGTCGGGAGGAATTCCCTCCTTGTCCTGGATCTT 2378512 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 ||||| ||| | |||||| || || || ||||| |||||||| |||||||| Sbjct 2378513 GGACTTGACGTTGTCGATGGTGTCGCTGGACTCAACCTCGAGGGTAATGGTCTTACCGGT 2378572 Score = 100 bits (110), Expect = 3e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||| | ||| | ||| |||||||||||| ||||| || || ||| Sbjct 2377641 AGACGGAGCACCAAGTGCAAGGTGCTTTCCTTTTGAATATTGTAATCCGAAAGGGTTCTG 2377700 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 ||| || | ||| || |||||||| ||||| || || ||||| || || ||||| || Sbjct 2377701 CCGTCCTCCAACTGCTTTCCTGCAAAGATCAATCGTTGTTGATCAGGTGGAATGCCCTCC 2377760 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || ||||| ||| ||| || || | || || ||||||||||| || | ||| Sbjct 2377761 TTGTCCTGAATCTTTGATTTAACATTATCAATGGTATCTGACGATTCCACTTCTAATGTA 2377820 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || || || || || || || |||||||| Sbjct 2377821 ATTGTCTTGCCAGTCAAGGTCTTGACAAAGATTTGCAT 2377858 Score = 96.9 bits (106), Expect = 4e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570 |||| || |||||||||||||||||||| || || || || ||| || || || Sbjct 2377884 TGTAAAGTCGATTCCTTTTGAATGTTGTAATCCGAAAGTGTACGACCGTCCTCAAGTTGC 2377943 Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630 || || ||||| || | ||| || |||||||| || || || || || ||||| || || Sbjct 2377944 TTACCAGCAAAGATAAGACGTTGTTGATCGGGTGGGATACCCTCCTTATCTTGGATCTTC 2378003 Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690 || || ||| | || || || ||||| || || | ||| || || || ||||| Sbjct 2378004 GACTTCACATTGTCGATGGTATCCGATGATTCAACCTCCAAAGTGATTGTCTTTCCGGTA 2378063 Query 134691 AAAGTTTTAACGAAAATTTGCAT 134713 | || || |||||||| ||||| Sbjct 2378064 AGGGTCTTGACGAAAATCTGCAT 2378086 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505396062532400