Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017-
05-31] 370 sequences; 44,096,448 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq1 107 2e-18
>seq1
Length=3544467
Score = 107 bits (118), Expect = 2e-18
Identities = 140/194 (72%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569
||| || || || || || || || || || ||| || |||| || || || || ||
Sbjct 2378111 GTGAAGGGTAGACTCTTTCTGGATATTATAATCGGAAAGGGTGCGACCATCTTCCAGTTG 2378170
Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629
|| || || |||||||||||||| || ||||| || |||||||| || |||||||| ||
Sbjct 2378171 CTTTCCGGCGAAAATCAAACGCTGTTGGTCGGGAGGAATGCCTTCCTTGTCTTGAATCTT 2378230
Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689
|| || ||| | ||||| || ||||| || || || || ||||| || |||||
Sbjct 2378231 AGACTTAACGTTGTCGATGGTGTCTGAAGATTCGACCTCAAGGGTGATGGTCTTTCCGGT 2378290
Query 134690 TAAAGTTTTAACGA 134703
| ||| |||||||
Sbjct 2378291 AAGAGTCTTAACGA 2378304
Score = 104 bits (114), Expect = 2e-17
Identities = 131/180 (73%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569
||| || ||||| ||||| || ||||||||||| | | |||| || || || || ||
Sbjct 2378393 GTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCACTCAAGGTGCGACCATCTTCAAGTTG 2378452
Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629
||| || || || ||||||||||| || ||||| || || || || || || || || ||
Sbjct 2378453 TTTTCCGGCGAAGATCAAACGCTGTTGGTCGGGAGGAATTCCCTCCTTGTCCTGGATCTT 2378512
Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689
||||| ||| | |||||| || || || ||||| |||||||| ||||||||
Sbjct 2378513 GGACTTGACGTTGTCGATGGTGTCGCTGGACTCAACCTCGAGGGTAATGGTCTTACCGGT 2378572
Score = 100 bits (110), Expect = 3e-16
Identities = 153/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| || | ||| | ||| | ||| |||||||||||| ||||| || || |||
Sbjct 2377641 AGACGGAGCACCAAGTGCAAGGTGCTTTCCTTTTGAATATTGTAATCCGAAAGGGTTCTG 2377700
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
||| || | ||| || |||||||| ||||| || || ||||| || || ||||| ||
Sbjct 2377701 CCGTCCTCCAACTGCTTTCCTGCAAAGATCAATCGTTGTTGATCAGGTGGAATGCCCTCC 2377760
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| || ||||| ||| ||| || || | || || ||||||||||| || | |||
Sbjct 2377761 TTGTCCTGAATCTTTGATTTAACATTATCAATGGTATCTGACGATTCCACTTCTAATGTA 2377820
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || || || || || || || || ||||||||
Sbjct 2377821 ATTGTCTTGCCAGTCAAGGTCTTGACAAAGATTTGCAT 2377858
Score = 96.9 bits (106), Expect = 4e-15
Identities = 143/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570
|||| || |||||||||||||||||||| || || || || ||| || || ||
Sbjct 2377884 TGTAAAGTCGATTCCTTTTGAATGTTGTAATCCGAAAGTGTACGACCGTCCTCAAGTTGC 2377943
Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630
|| || ||||| || | ||| || |||||||| || || || || || ||||| || ||
Sbjct 2377944 TTACCAGCAAAGATAAGACGTTGTTGATCGGGTGGGATACCCTCCTTATCTTGGATCTTC 2378003
Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690
|| || ||| | || || || ||||| || || | ||| || || || |||||
Sbjct 2378004 GACTTCACATTGTCGATGGTATCCGATGATTCAACCTCCAAAGTGATTGTCTTTCCGGTA 2378063
Query 134691 AAAGTTTTAACGAAAATTTGCAT 134713
| || || |||||||| |||||
Sbjct 2378064 AGGGTCTTGACGAAAATCTGCAT 2378086
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505396062532400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |