Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq4 297 3e-75 seq7 120 4e-22 >seq4 Length=2560074 Score = 297 bits (328), Expect = 3e-75 Identities = 1325/2071 (64%), Gaps = 61/2071 (3%) Strand=Plus/Plus Query 68374 GTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGA 68433 || || ||||| |||| || || | | ||||||| ||||||||| ||||| |||| | Sbjct 939887 GTGAATTGAATAGGTGCTGAGGCAGCCATAGTACGTAAATAGTACATTCCGGTCTTCAAA 939946 Query 68434 CCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATA 68493 || | |||| || |||||||| ||| | ||| | ||||| || Sbjct 939947 CCCAATTTCCAACCAGCAAAATGCATGGATGTAATCTTGCCCATTGTAGGATCCTTCATG 940006 Query 68494 TGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATA 68553 ||||| ||||| |||||| |||||||||||| || || | ||| || ||||||| | | Sbjct 940007 TGAATGTTCATTGATTGAGATTGATCGATGAATGCACCACGATCAGCAGCCATTTGAACA 940066 Query 68554 ATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCATCTGGAAGG 68613 || | ||||| |||||||||| |||||| ||| ||||| ||| |||||| Sbjct 940067 ATTGTTCGTTGAGAGATTTCCCAAACAGTCTTGTAAAGAGCCTTGATGTCAGCTGGAATA 940126 Query 68614 CTCG---TATTTTGAATGGATCCACCATCGGATATAATTATATTCTTGATCTCATCATTC 68670 | | |||||||||||||||||||||| | || || ||||| || | ||| | Sbjct 940127 TTGGGGATATTTTGAATGGATCCACCATCAGCAATGATACGGTTCTTCATATTGTCAGAC 940186 Query 68671 CACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGC---GGATTAACTATTTGAAATTCC 68727 || | | || | || || |||| || || ||||| | ||| ||||| Sbjct 940187 CAGAGACCCATATC-GACAAGGTCCTT--GAGAAGCCATGGGTTAACGACTTGGAATTCT 940243 Query 68728 CCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTATTT 68787 || | | || | ||||| ||| || || || || || || | | |||| || Sbjct 940244 CCGGCAAGAACACGACGAGAGTAGATGTTTGAAGTGTAAGGCTCGAAACATTCGTTGAAG 940303 Query 68788 CCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGA 68847 || |||||||| | || ||||| ||||||||||| || | | | || | | Sbjct 940304 CCAAGAATTTGGGATGTGCTAGCAGTAGGCATAGGTGCAACTAGGAGAGAGTTGCGGATT 940363 Query 68848 CCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGATCAGATGGTACAACA 68907 || ||| |||| | || | | | ||||||||| | ||||| ||| ||| Sbjct 940364 CCGTGTTGCTTGATGGATTGCTTCAAAGAGTCCCAATCCCACAAATCAGTAGGTGTAACC 940423 Query 68908 TTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCATTATATGTTTCATAA 68967 ||| | ||||||||| || || ||| | || || | ||| ||||| || Sbjct 940424 CCCCACATATCGTATTGAAGTTCACCCTTAGAGACTGGGGAGCCTTGATAGGTTTCGTAT 940483 Query 68968 GGTCC---TTCCTGTTC-AGCTAGTTCACAACTTGCCTCTAATGCACCGTAATAAATTGT 69023 || || ||||| | | | || | | || | | || ||| ||| || || || Sbjct 940484 GGGCCAAGTTCCTTTGCGATCTCGA-CGGAAGAGGTC---AAGGCAGCGTGGTAGATGGT 940539 Query 69024 TTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGGATAATGTAAAAG 69083 |||||||| | | ||||| | || |||||| | || |||||| | | || || Sbjct 940540 CTCGAAAATTTGTATGTTGAGGTGTTTGGCTTCTGGGGAGTCAAATGGAAGACG-AAGAG 940598 Query 69084 --AATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTCTTATTT 69141 || ||| ||||| || | || ||||| || | ||||||||| ||| | ||| Sbjct 940599 CCAAGAAA-GCATCAGCAAGACCTTGAACACCGACCGCGATAGGTCGATGACGGAAATT- 940656 Query 69142 GAACTTTCAG-CTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAGATTTCG 69200 | |||| | | |||| | ||||| || || || || ||||| ||||| | |||| Sbjct 940657 GCTTTTTCGGGCCTCTGCGACTGGATAGTAGTTGATGTCAATAATCTTATTCAAGTTTCT 940716 Query 69201 GACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAA-------TCGTCCATCTA 69253 || || |||| || || || | || || | |||||| | || | ||| | Sbjct 940717 AACAACAACTTGGACAACCTCGTGAAGCTTTTGGAAATCATAAGTTCCCTCATTCATGTT 940776 Query 69254 TAACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGAATTTG 69313 | ||| | | | || | || || | ||||| || ||||||| | || Sbjct 940777 GACGAAAGTTGGTAAA-GCGATGGAAGCCAAGTTACAGCAAGCAACCTCATCTGG---TG 940832 Query 69314 CA---TATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCT 69370 || || | | || || || || | ||| | ||||| ||||| || | | Sbjct 940833 CAGAGTACTCGACGATTTCCGTGCACAAATTGGAGCTGCGAATAGTACCCAGGTTCTTTT 940892 Query 69371 GATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCT 69430 | || ||||| ||||| || || ||||||||||| || || ||| | || || || | | Sbjct 940893 GGTTGCTCTTCTTGTTGCATGCATCCTTGTAAAGCATGAAAGGATTTCCGGTCTCGGTTT 940952 Query 69431 GAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACGGTCTTGTAACGCTTCT 69490 ||| || | ||| || | ||||| ||| || || |||||| || ||| Sbjct 940953 GAGCCTCAAGAATGGAGTACCAAAGTTTTTGAGCCTTGATA---GTCTTGCGACCCTTGC 941009 Query 69491 CT---TTTTCATATTGT--GTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAA 69545 || ||||| || ||| | |||| ||||| || || || ||||||| | || Sbjct 941010 CTGCCTTTTCGTAACCCTCGTAGAGAGCC--TCGAACTCCTCGCCATAAACATCTGCTAA 941067 Query 69546 TCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTT---AACTCGTTT 69602 || |||||||| || || ||||| | | ||| ||| ||| ||| ||| || || Sbjct 941068 ACCTGGACATTCGTTGGGGCACATGAGAGTCCA---ATCTCCATTCTTTTCAACACGCTT 941124 Query 69603 CATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCATT 69662 ||| |||||||| |||||||| | || |||||||| | | | | |||||| || Sbjct 941125 CATGAATAGATCAGGAATCCACAAGGCGTAGAAGAGATCGCGTGCACGAACTTCTTCCTT 941184 Query 69663 TCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATA 69722 || |||||| ||||| || ||||| | || ||| | ||||||||| || || || Sbjct 941185 GCCATGATTTTTGCGTAGATCAAGGAACTCAAAAACATCCGCATGCCATGGCTCAAGGTA 941244 Query 69723 TATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATT 69782 | || | | | || || || ||||| || || ||||| | |||||||||||||| || Sbjct 941245 AACAGCAAAGGCACCAGGACGCTTATTACCACCTTGATCAACATATCTGGCAGTGTTGTT 941304 Query 69783 ATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACT 69842 | |||| ||||| |||| || || ||||| || ||||| || || | || || Sbjct 941305 GAAAACTCGGAGCATAGGAACGATGCCGTTAGAGTTTCCATTGGTACCGGCTATGTATGC 941364 Query 69843 TCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAG 69902 || | || || || |||| ||||| || || || || | || ||||| | Sbjct 941365 GCCAGTAGCACGGATTCGGTGAATATTGAGACCAATACCACCAGCATTCTTTGAGATCAT 941424 Query 69903 AGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAG 69962 ||||||| ||||| || || || ||||| || || || || || |||||| | ||| Sbjct 941425 AGCACAAATCTTCAAAGTATCGTAAATACCATCAATACTGTCCTCCTTCATGTCGATAAG 941484 Query 69963 AAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTG 70022 || || || | ||| ||| ||| |||||| || | ||| || || || || Sbjct 941485 GAAGCATGATGAAAGTTGTGCTTGTGGAGTACCCGCAGAGAAGAGTGTTGGCGAGGCATG 941544 Query 70023 AGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATC-CCACT 70081 ||||| | || | || | || ||||||||||| || || ||| || || ||| Sbjct 941545 TGTGAAGTACTTGTTTGACATCAAGTTGTATGTTTCGATGGCACTTTCAATGTCATCACC 941604 Query 70082 GATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTAT 70141 | ||||| || | || |||||||| | ||| || || || |||||| | ||| || Sbjct 941605 G-TGAATACCAACGGCAACACGCATGATCATTTGTTGTGGACGTTCTGCAACTTTGCCAT 941663 Query 70142 TTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTA--TGAAAA 70199 | | ||||||||| || ||||| || || ||||| || | || ||||| Sbjct 941664 CAAGACGTAGAAGGTATGATCGCTCGAGAGTCTTGAATCCAAAGTATTGATAGTTGAAA- 941722 Query 70200 GTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTTGGTAACTATATCCAT 70259 |||| ||||| | ||| ||||||| |||| |||| || | | |||| | || | Sbjct 941723 -TCTCGGTCGTAGACAATGGCAGAATTAAGTTCCTCCTCATGTCTCATAAC-ACATTCGA 941780 Query 70260 AACAGTAGGTG-AGATAATCGGAGATCGTTTACCATTTTTAGGATTAACATAGTTGAATA 70318 || | || || || |||||| | | |||||| | || || ||| | | ||| Sbjct 941781 AAGTTTCCTTGCTAATCATAGGAGATGCTGTGCCATTTCTTGGGTTTGTATATTGGTATA 941840 Query 70319 AATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATATGGCTA 70378 |||| || || | || ||||||| |||| ||||| | || || | || | Sbjct 941841 AATCGCGAATAACGTGCGAGAACTGTTTTTTGGTTTGTTTGTGAAGGTTGGAGACTGCAA 941900 Query 70379 TTCTGGCTGCTAGAATAGCATAGTCAGGATG 70409 | | || |||||||| ||||| || ||||| Sbjct 941901 TACGAGCAGCTAGAATGGCATAATCGGGATG 941931 >seq7 Length=2023280 Score = 120 bits (132), Expect = 4e-22 Identities = 296/443 (67%), Gaps = 6/443 (1%) Strand=Plus/Minus Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385 |||||||| |||||||| | || |||||||| ||||| ||||| |||| || ||||| Sbjct 1768570 TTTTGGTAATCACCAACTCTCTTTTCGAAAAAGTTAGTCTTGCCGGCCAAGGAAATATTC 1768511 Query 39386 TCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATC 39445 |||||||| ||||| ||||| | | || || ||| | || || | | Sbjct 1768510 TCCATGAAGTCAAATGGATTGGCAGATTTGTAGACTTTGTCGTTGCCCAAAGCGATGAGG 1768451 Query 39446 AATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGT 39505 | | ||| ||||| ||||| ||||| ||||| | | ||||| |||| || Sbjct 1768450 AGACGATCAGCAACGAATTCGATGTACTGCTTCATGAGGGTGGAGTTCATGCCTAGAAGA 1768391 Query 39506 TTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTATC 39565 | || |||||||| || | || |||| ||||| | |||||||| || || | | Sbjct 1768390 GCACAAGGAAGAGCCTCGGTCAAGAATTCTTGCTCGATTGCGACGGCCTCGGTGATGA-C 1768332 Query 39566 GATGTT--ACTACCT-CATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCG 39622 | | || || | | | | | || || ||| | ||| || | | ||| ||| Sbjct 1768331 G-TCTTGGACAGCTTGCTTGGATGGGCGG-TGCTTGAGATGGGAGAAGAGGAGGCATGCG 1768274 Query 39623 AAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGC 39682 || || || || || || || | || | |||||| ||||| |||||||| | | Sbjct 1768273 AAATCGGTGTGGAGACCTTCGTCACGGGAGATGAGTTCGTTTGAAAAGGTGAGTCCGGCC 1768214 Query 39683 ATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCT 39742 || ||||||||||| |||||||| || || | || || ||||| || || ||||| ||| Sbjct 1768213 ATGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGATCCGGAGAAAAAGATACCT 1768154 Query 39743 TCTACTGCTGCAAATGCAACAAG 39765 || || || || ||||| ||||| Sbjct 1768153 TCAACGGCAGCGAATGCGACAAG 1768131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686905623046800