Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq4 226 4e-54 >seq4 Length=2560074 Score = 226 bits (250), Expect = 4e-54 Identities = 1168/1823 (64%), Gaps = 79/1823 (4%) Strand=Plus/Plus Query 110368 ATAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATATGCATAGAAGAGAGCTT 110427 ||||||||| |||||||| | || |||||| | | |||||| || | | ||| Sbjct 939925 ATAGTACATTCCGGTCTTCAAACCCAATTTCCAACCAGCAAAATGCATGGATGTAATCTT 939984 Query 110428 GGACATCGTTGGACTTTCCATGAAGAGGTTCATACTTTGACTTTGGTCAATGAAGCGCCC 110487 | ||| || ||| | |||| | |||||| |||| ||| || ||||| || Sbjct 939985 GCCCATTGTAGGATCCTTCATGTGAATGTTCATTGATTGAGATTGATCGATGAATGCACC 940044 Query 110488 CCGTTGTGCCGCCATATCAATGACATCCTTCATCTTA---ATTTCCCAAACTGTGCGATA 110544 || | || ||||| | || | | ||| | | | ||||||||||| || || Sbjct 940045 ACGATCAGCAGCCATTTGAACAA--TTGTTCGT-TGAGAGATTTCCCAAACAGTCTTGTA 940101 Query 110545 GAGATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAACCCCCCGCCTTCAC 110604 ||| |||||| ||| |||| |||| | |||||| || ||||| || || ||| Sbjct 940102 AAGAGCCTTGATGTCAGCTGGAATATTGGGGATATTTTGAATGGATCCACCA----TCAG 940157 Query 110605 CA-TGAGA---TCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTGACGA 110660 || ||| | | |||||||| | ||||||||||| || | ||||| |||| | Sbjct 940158 CAATGATACGGTTCTTCATATTGTCAGACCAGAGACCCATATCGACAAGGTCCTTGAGAA 940217 Query 110661 GGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTG 110720 | ||| || | || || || || || | | ||||||||||| | Sbjct 940218 GCCATGGGTTAACGACTTGGAATTCTCCGGCAAGAACACGACGAGAGTAGATGTTTGAAG 940277 Query 110721 TGTATGGTTCAAAGCATTCATTATTACCCAAGA-TTTGTGCGGTGGAGGCTGTTGGCATT 110779 |||| || || || ||||| || | |||||| |||| | ||| || || ||||| Sbjct 940278 TGTAAGGCTCGAAACATTCGTTGA-AGCCAAGAATTTGGGATGTGCTAGCAGTAGGCATA 940336 Query 110780 GGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCC 110839 ||||| | | ||| ||| || | || | | ||||||| || ||| | | ||| Sbjct 940337 GGTGCAACTAGGAGAGAGTTGCGGATTCCGTGTTGCTTGATGGATTGCTTCAAAGAGTCC 940396 Query 110840 CAGTCGTAGT--TGAGCTTGGTTTCACCTTCCCACATGTCAAACTGAAG--CACCCCTTG 110895 || || | | || | ||| | ||| ||||||| || | ||||| ||||| | | Sbjct 940397 CAATCCCACAAATCAG-TAGGTGTAACCC-CCCACATATCGTATTGAAGTTCACCCTTAG 940454 Query 110896 GGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTC-ACAGC 110954 ||| ||||| || | | ||||||| || | || | | | || | || || | Sbjct 940455 AGACTGGGGAG--CCTTGATAGGTTTCGTATGGGCCAAGTTCCTTTGCGATCTCGACGGA 940512 Query 110955 TCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTT 111014 || ||| | ||||| || ||||| || || || | || | | ||||||| Sbjct 940513 AGAGGTCAAGGCA-GCGTGGTAGATGGTCTCGAAAATTTGTATGTTGAGGTGTTTGGCTT 940571 Query 111015 CATCTGAATCAAATGCGTAGCGGCACAA--AATAAATACATCCGCGAGACCTTGAACACC 111072 | || ||||||| | || | | | || ||| |||| || |||||||||||||| Sbjct 940572 CTGGGGAGTCAAATG-GAAGACGAAGAGCCAAGAAAG-CATCAGCAAGACCTTGAACACC 940629 Query 111073 CAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCT-CAACGGGATAAAAAT 111131 | | ||||||| || || | ||| ||||| || ||| | || ||||| | | Sbjct 940630 GACCGCGATAGGTCGATGACGGAAATTGCTTTTTCGGGCC-TCTGCGACTGGATAGTAGT 940688 Query 111132 TTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATT-TCATGAAGTTTT 111190 | ||||||| | || | ||| | ||||| ||| | | || ||||| ||| Sbjct 940689 TGATGTCAATAATCTTATTCAAGTTTCTAACAACAA-CTTGGACAACCTCGTGAAGCTTT 940747 Query 111191 TCATAATCAAAAGTGCGAGTCTC-TTCAT--TGACATACTTTGGAAGGGCGATTGATGCC 111247 | ||||| |||| | ||| ||||| |||| | |||| | ||||| || ||| Sbjct 940748 TGGAAATCATAAGTTCC---CTCATTCATGTTGACGAAAGTTGGTAAAGCGATGGAAGCC 940804 Query 111248 AAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTG 111307 || || || ||| |||||| | | |||||| | ||||| || || || ||| Sbjct 940805 AAGTTACAGCAAGCAACCTCATCTGGTGCAGAGTACTCGACGATTTCCGTGCACAAATTG 940864 Query 111308 GAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAG 111367 || || ||| || |||| ||||||||||| |||||||||||||| ||||||||||| Sbjct 940865 GAGCTGCGAATAGTACCCAGGTTCTTTTGGTTGCTCTTCTTGTTGCATGCATCCTTGTAA 940924 Query 111368 AGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAACATCGGCG 111427 |||||| | || | || ||||| || || | | ||||| | | ||||| | Sbjct 940925 AGCATGAAAGGATTTCCGGTCTCGGTTTGAGCCTCAAGAATGGAGTACCAAAGTTTTTGA 940984 Query 111428 GC--TGGTACAATGGCGTTGGCCCGTCCCT-CCGCCTCGTACTTTGTGTAGAGGGCTTCA 111484 || || || | || | ||| | ||| || ||||| |||||| || || Sbjct 940985 GCCTTGATAGTCTTGC---GACCCTTGCCTGCCTTTTCGTAACCCTCGTAGAGAGCCTCG 941041 Query 111485 AACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCAT 111544 |||||||| || | || | | |||||| | || || || | |||| ||| Sbjct 941042 AACTCCTCGCCATAAACATCTGCTAAACCTGGACATTCGTTGGGGCACATGAGAGTCCAA 941101 Query 111545 TGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGA 111604 | ||| | ||||| ||||||||||| || || |||||||||| || | |||||| Sbjct 941102 TCTCCATTCTTTTCAACACGCTTCATGAATAGATCAGGAATCCACAAGGCGTAGAAGAGA 941161 Query 111605 TCTC-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGAT 111663 || | | || ||| | ||||| | || || || |||| ||||||||||| | | Sbjct 941162 TCGCGTGCA-CGAACTTCTTCCTTGCCATGATTTTTGCGTAGATCAAGGAACTCAAAAAC 941220 Query 111664 ATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGC 111717 |||||| |||||||||||||| || || || | | || ||||| ||| | Sbjct 941221 ATCCGCATGCCATGGCTCAAGGTAAACAGCAAAGGCACC---AGGACGCTTATTACCACC 941277 Query 111718 TTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGA 111777 ||||| ||||| | || ||| ||| || || || ||||| |||| || || | || Sbjct 941278 TTGATCAACATATCTGGCAGTGTTGTTGAAAACTCGGAGCATAGGAACGATGCCGTTAGA 941337 Query 111778 TTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGAT---GTGCAT 111834 | ||||| || || | || ||| || | | || |||| ||| || Sbjct 941338 GTTTCCATTGGTACC-------GGCTATGTAT--GCGCCAGTAGCACGGATTCGGTGAAT 941388 Query 111835 ------CCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATA 111888 |||||||| ||||| ||||||||| ||||| | | | ||| | || Sbjct 941389 ATTGAGACCAATACCACCAGCATTCTTTGAGATCATAGCACAAATCTTCAAAGTATCGTA 941448 Query 111889 GATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCT 111948 ||||| | || ||||||||| || ||||||||||||| || | || | | Sbjct 941449 AATACCATCAATACTGTCCTCCTTCATGTCGATAAGGAAGCATGATGAAAGTTGTGCTTG 941508 Query 111949 TGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCT 112007 ||| ||||| ||| |||||| ||||| | || || |||| ||| | | |||||| Sbjct 941509 TGGAGTACCCGCAGAGAAGAGTGTTGGCGAGGCATGTGTGAA-GTACTTGTTTGACATCA 941567 Query 112008 TGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCA 112067 || |||||| || | | || |||||||| || ||||| || || | || || |||| Sbjct 941568 AGTTGTATGTTTCGATGGCACTTTCAATGTCATCACCGTGAATACCAACGGCAACACGCA 941627 Query 112068 TGAACATGTACTGTGGGGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATA-GCTCTTC 112126 ||| ||| | ||||| ||| | ||||||| || ||| |||| || | || | Sbjct 941628 TGATCATTTGTTGTGGACGTTCTGCAACTTTGCCATCAAGACGTAGAAGGTATGATC-GC 941686 Query 112127 TCAAGGGTTTTGAGACCAAAGTA 112149 || || || |||| |||||||| Sbjct 941687 TCGAGAGTCTTGAATCCAAAGTA 941709 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628029095352000