Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq4 190 3e-43 seq7 111 2e-19 >seq4 Length=2560074 Score = 190 bits (210), Expect = 3e-43 Identities = 1107/1741 (64%), Gaps = 49/1741 (3%) Strand=Plus/Plus Query 117843 TAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTTG 117902 |||||||| || ||||| | ||| ||||| || | |||||| || | | |||| Sbjct 939926 TAGTACATTCCGGTCTTCAAACCCAATTTCCAACCAGCAAAATGCATGGATGTAATCTTG 939985 Query 117903 GAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCC 117962 | || ||| | |||| | |||||| ||| |||||||||||||| || Sbjct 939986 CCCATTGTAGGATCCTTCATGTGAATGTTCATTGATTGAGATTGATCGATGAATGCACCA 940045 Query 117963 CGATCCGCCGCCATATCAATCACATCCTTCATCTTGA--TTTCCCACACAGTCCTGTAGA 118020 ||||| || ||||| | || || || ||| | || ||||||| |||||| |||| | Sbjct 940046 CGATCAGCAGCCATTTGAA-CA-ATTGTTCGTTGAGAGATTTCCCAAACAGTCTTGTAAA 940103 Query 118021 GGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCCTTGACCA 118080 | ||| || ||| |||| |||| ||||||||| ||||||||||| | | | Sbjct 940104 GAGCCTTGATGTCAGCTGGAATATTGGGGATATTTTGAATGGATCCACCATCAGCAATGA 940163 Query 118081 TGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAG--ATG 118138 | | | |||||||| | ||||||||||| || | || |||| | || ||| Sbjct 940164 TACGGTTCTTCATATTGTCAGACCAGAGACCCATATCGACAAGGTCCTTGAGAAGCCATG 940223 Query 118139 CTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGA-TAGATATTGGTCGTGT 118197 | | || || || || || || || || | ||| ||||| || | |||| Sbjct 940224 GGT--TAACGACTTGGAATTCTCCGGCAAGAACACGACG-AGAGTAGATGTTTGAAGTGT 940280 Query 118198 ATGGCTCAAAGCACTCATTGTTACCCAAGA-TTTGGGCTGTGGAGGCTGTGGGCATGGGT 118256 | ||||| || || || ||| | |||||| |||||| |||| || || ||||| ||| Sbjct 940281 AAGGCTCGAAACATTCGTTGA-AGCCAAGAATTTGGGATGTGCTAGCAGTAGGCATAGGT 940339 Query 118257 GCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAG 118316 || | || || ||| |||| || | || | | ||| || ||| | || |||||| Sbjct 940340 GCAACTAGGAGAGAGTTGCGGATTCCGTGTTGCTTGATGGATTGCTTCAAAGAGTCCCAA 940399 Query 118317 TCGTAGT--TGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACG 118374 || | | || | || | ||| ||||||||| | || || ||| | || Sbjct 940400 TCCCACAAATCAG-TAGGTGTAACCCC-CCACATATCGTATTGAAGTTCACCCTTAGAGA 940457 Query 118375 CTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCT 118434 |||| || || | | | || || |||||||| ||| || | ||| | | Sbjct 940458 CTGGGGAGCCTTGATAGGTTTCGTATGGGCCAAGTTCCTTTGCGATCTCGACGGAAGAGG 940517 Query 118435 CGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGG 118494 | ||| ||||| || || || || ||||| | || | ||||| || || Sbjct 940518 TCAAGGCAGCGTGGTAGATGGTCTCGAAAATTTGTATGTTGAGGTGTTTGGCTTCTGGGG 940577 Query 118495 AATCAAACGCGAGTCGGC-ACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCA 118553 | ||||| | || || | || ||| |||| || |||||||| ||||||| | Sbjct 940578 AGTCAAATGGAAGACGAAGAGCCAAGAAAG-CATCAGCAAGACCTTGAACACCGACCGCG 940636 Query 118554 ATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCC-ACGGGATAAAAATTCCTATC 118612 || || ||||| | | ||| || || || ||| | || ||||| | || | || Sbjct 940637 ATAGGTCGATGACGGAAATTGCTTTTTCGGGCC-TCTGCGACTGGATAGTAGTTGATGTC 940695 Query 118613 GATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATC 118672 |||| | |||| | ||| | ||||| | | || |||||||||| | |||| Sbjct 940696 AATAATCTTATTCAAGTTTCTAACAACAACTTGGACAACCTCGTGAAGCTTTTGGAAATC 940755 Query 118673 AAAACTGCGAGTCTC-TTCAT--TGACATACTTAGGAAGGGCGATTGACGCCAGATTACA 118729 | || | | ||| ||||| |||| | | || | ||||| || |||| ||||| Sbjct 940756 ATAAGTTCC---CTCATTCATGTTGACGAAAGTTGGTAAAGCGATGGAAGCCAAGTTACA 940812 Query 118730 CACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTT 118789 || |||||| ||| |||||| | |||||||||||||| || || || Sbjct 940813 GCAAGCAACCTCATCTGGTGCAGAGTACTCGACGATTTCCGTGCACAAATTGGAGCTGCG 940872 Query 118790 AATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTA 118849 ||| || |||| ||||||||| || ||| |||| || |||||||||||||||||| | Sbjct 940873 AATAGTACCCAGGTTCTTTTGGTTGCTCTTCTTGTTGCATGCATCCTTGTAAAGCATGAA 940932 Query 118850 TGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACATCGGCAGCTGGCAC 118909 || | || ||||| ||||| | || ||||| | | ||| | | ||| | Sbjct 940933 AGGATTTCCGGTCTCGGTTTGAGCCTCAAGAATGGAGTACCAAAGTTTTTGAGCCTTGAT 940992 Query 118910 AGTGGCGTTGGCTCGCCCCT---CTTCC---TCGTACTTTGTGTAGAGGGCTTCAAACTC 118963 ||| ||| || |||| || || ||||| |||||| || || ||||| Sbjct 940993 AGT---CTTG---CGACCCTTGCCTGCCTTTTCGTAACCCTCGTAGAGAGCCTCGAACTC 941046 Query 118964 TTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACC 119023 || || | |||| | ||||| | | ||||| | ||||| ||| | || Sbjct 941047 CTCGCCATAAACATCTGCTAAACCTGGACATTCGTTGGGGCACATGAGAGTCCAATCTCC 941106 Query 119024 ACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCG 119083 | || ||||| ||||||||||| || || || ||||| | || |||||||||| || Sbjct 941107 ATTCTTTTCAACACGCTTCATGAATAGATCAGGAATCCACAAGGCGTAGAAGAGATCGCG 941166 Query 119084 ACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGC 119143 ||| ||||||| | || ||||| || | || | || || | | |||||| Sbjct 941167 TGCACGAACTTCTTCCTTGCCATGATTTTTGCGTAGATCAAGGAACTCAAAAACATCCGC 941226 Query 119144 GTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACGACCAGCCTGGTTTAC 119200 ||||| || || ||||| || || | | || ||| | |||| | || | || Sbjct 941227 ATGCCATGGCTCAAGGTAAACAGCAAAGGCACCAGGACGCTTATTACCACCTTGATCAAC 941286 Query 119201 ATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTGGCCATT 119260 ||| || |||||| ||| || || || ||||| |||| ||| || | || | ||||| Sbjct 941287 ATATCTGGCAGTGTTGTTGAAAACTCGGAGCATAGGAACGATGCCGTTAGAGTTTCCATT 941346 Query 119261 TGTCCC--CCGAATACGAGACTTATTGGCTCTGACATCGTGGATGTGCATACCAATACCC 119318 || || | || | | | | | || | || ||| || | | ||||||||| Sbjct 941347 GGTACCGGCTATGTATGCGCC--AGTAGCACGGATTCGGTGAATATTGAGACCAATACCA 941404 Query 119319 CCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAG 119378 || || ||||||||| || || | | | | | |||| || ||||| || | Sbjct 941405 CCAGCATTCTTTGAGATCATAGCACAAATCTTCAAAGTATCGTAAATACCATCAATACTG 941464 Query 119379 TCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTG-GGTGTACCAGCGTT 119437 || |||| | |||| |||||||| || | ||| || || || ||||| || Sbjct 941465 TCCTCCTTCATGTCGATAAGGAAGCATGATGAAAGTTG-TGCTTGTGGAGTACCCGCAGA 941523 Query 119438 GAAGAGAGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTTGTCGTAGGTCTCCA 119496 |||||| ||||| | || || |||| ||| | | |||||| || ||| || || | Sbjct 941524 GAAGAGTGTTGGCGAGGCATGTGTGAA-GTACTTGTTTGACATCAAGTTGTATGTTTCGA 941582 Query 119497 AGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGG 119556 | | |||||| || ||||||||||| | | || ||||| | ||| | ||| | Sbjct 941583 TGGCACTTTCAATGTCATCACCGTGAATACCAACGGCAACACGCATGATCATTTGTTGTG 941642 Query 119557 G 119557 | Sbjct 941643 G 941643 >seq7 Length=2023280 Score = 111 bits (122), Expect = 2e-19 Identities = 153/213 (72%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 130027 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 130086 ||||||||| |||||||||||||||||||| || || ||| || || | ||||||||| Sbjct 1768265 GTGGAGACCTTCGTCACGGGAGATGAGTTCGTTTGAAAAGGTGAGTCCGGCCATGAGACC 1768206 Query 130087 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 130146 |||||||| | |||||| || | || || || ||||| ||||| || || || Sbjct 1768205 ACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGATCCGGAGAAAAAGATACCTTCAACGGC 1768146 Query 130147 CGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATC---AAACCACTTCAT 130203 ||||| || | ||||| | |||||||| ||| || |||| || ||| || | Sbjct 1768145 AGCGAATGCGACAAGACGTTGAGCAAAGG---TGGAGTTCTTATCTTGAATCCATTTGAC 1768089 Query 130204 CGCCCACTGCGCCTTTTTCTCGATACACGGGAC 130236 ||||| | ||||| |||| ||| || || || Sbjct 1768088 AGCCCAGTCGGCCTTCTTCTTGATGCAAGGAAC 1768056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618432339737200