Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq1 167 7e-36 seq2 159 1e-33 seq15 123 8e-23 seq12 102 2e-16 seq5 93.3 1e-13 >seq1 Length=3544467 Score = 167 bits (184), Expect = 7e-36 Identities = 178/235 (76%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | || || | ||| | ||| || || |||||||| || | Sbjct 2377852 TTTGCATACCACCACGGAGACGAAGGACCAAATGTAAAGTCGATTCCTTTTGAATGTTGT 2377911 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 |||| || | ||| || || || |||||||| || ||||||||||| |||||||| |||| Sbjct 2377912 AATCCGAAAGTGTACGACCGTCCTCAAGTTGCTTACCAGCAAAGATAAGACGTTGTTGAT 2377971 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | || || || || || ||||| || || || | || ||||| || || | ||| |||| Sbjct 2377972 CGGGTGGGATACCCTCCTTATCTTGGATCTTCGACTTCACATTGTCGATGGTATCCGATG 2378031 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 |||||| || | || | |||||||||||| || || || || ||||||||||| Sbjct 2378032 ATTCAACCTCCAAAGTGATTGTCTTTCCGGTAAGGGTCTTGACGAAAATCTGCAT 2378086 Score = 152 bits (168), Expect = 2e-31 Identities = 165/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | ||| || || | ||||| ||||||||||| || ||||||||||| Sbjct 2378084 CATACCACCACGAAGTCTGAGGACCAAGTGAAGGGTAGACTCTTTCTGGATATTATAATC 2378143 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || |||||||| ||||| ||||| || || || | ||| || || || || Sbjct 2378144 GGAAAGGGTGCGACCATCTTCCAGTTGCTTTCCGGCGAAAATCAAACGCTGTTGGTCGGG 2378203 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 |||||| ||||| || || ||||| |||| || || || || || | || || | ||| Sbjct 2378204 AGGAATGCCTTCCTTGTCTTGAATCTTAGACTTAACGTTGTCGATGGTGTCTGAAGATTC 2378263 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725 || ||||| || | ||||||||||| || || || || Sbjct 2378264 GACCTCAAGGGTGATGGTCTTTCCGGTAAGAGTCTTAAC 2378302 Score = 138 bits (152), Expect = 3e-27 Identities = 145/191 (76%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 140547 TCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAG 140606 || ||||||||||| ||||| || | |||| || || || | || ||||| |||||| Sbjct 2377668 TCCTTTTGAATATTGTAATCCGAAAGGGTTCTGCCGTCCTCCAACTGCTTTCCTGCAAAG 2377727 Query 140607 ATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTA 140666 || | ||||| |||||||| ||||| || || || |||||||| || | ||| |||||| Sbjct 2377728 ATCAATCGTTGTTGATCAGGTGGAATGCCCTCCTTGTCCTGAATCTTTGATTTAACATTA 2377787 Query 140667 TCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACA 140726 ||||| | ||| || | ||| ||||| | ||||| |||||| || || | || || ||| Sbjct 2377788 TCAATGGTATCTGACGATTCCACTTCTAATGTAATTGTCTTGCCAGTCAAGGTCTTGACA 2377847 Query 140727 AAAATCTGCAT 140737 || || ||||| Sbjct 2377848 AAGATTTGCAT 2377858 Score = 129 bits (142), Expect = 2e-24 Identities = 161/218 (74%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | ||| || || | || ||||| ||||| || || || || | Sbjct 2378362 TTTGCATACCACCACGAAGTCTGAGGACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGT 2378421 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | ||| || || || |||||||||||||||||||| || ||||| | ||| || || | Sbjct 2378422 AGTCACTCAAGGTGCGACCATCTTCAAGTTGTTTTCCGGCGAAGATCAAACGCTGTTGGT 2378481 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | ||||||||||| || || ||||| || || | || || || || || | || | || Sbjct 2378482 CGGGAGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTC-GCTG 2378540 Query 140683 G-TTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGT 140719 | ||||| || || |||| ||||| ||||| | ||| Sbjct 2378541 GACTCAACCTCGAGGGTAATGGTCTTACCGGTCACTGT 2378578 Score = 86.0 bits (94), Expect = 2e-11 Identities = 113/155 (73%), Gaps = 4/155 (3%) Strand=Plus/Minus Query 266967 CCAGTAATCGGCGATAAATTTTCTAGTCGCCACGGACAAAAAGGTACCATTGGTACGATT 267026 ||||| || || ||||| ||||| ||||| |||||||| || ||| ||| | | Sbjct 1375397 CCAGTCATTGGAGATAAGTTTTCCAGTCGTCACGGACAGAAGGGTGT--TTGTTCACAAA 1375340 Query 267027 ATT--CCTGAAGAAAATATGCCATTTAATGAAGATGGAATTAGACCTGATATTATTATTA 267084 | | || | || | |||||||||| | ||| || ||| |||||||| ||||||| Sbjct 1375339 AGTGGCCAGCAGTAGATATGCCATTCACGGAATCCGGTATTCAACCTGATACCATTATTA 1375280 Query 267085 ATCCTCATGCTATTCCTAGTCGTATGACAATTGGT 267119 ||||||| ||| | ||| ||||||||| |||||| Sbjct 1375279 ATCCTCACGCTTTCCCTTCTCGTATGACTATTGGT 1375245 >seq2 Length=3453044 Score = 159 bits (176), Expect = 1e-33 Identities = 260/373 (70%), Gaps = 6/373 (2%) Strand=Plus/Plus Query 378127 CCATCATCTCCATATGAGAATTGAACAATTTTATCTTTATTGTTTCTTACAGTCATATCA 378186 ||||| || ||||| |||||||||||| | | | ||| | || || ||| Sbjct 2127039 CCATCTTCACCATAGACGAATTGAACAATATCACCGAGGGAGTTACGAACGGTACCGTCA 2127098 Query 378187 TATCTAACCATTAAATCTTCTAATGCTTTAATAAGTCGTCGAGAAATATAACCAGTTTGA 378246 ||| || |||| | ||| || | ||||| | ||| || || ||| |||||||||| Sbjct 2127099 TATTTAGCCATGACATCCTCAAGAGCTTTGACAAGACGACGTTGAATGTAACCAGTTTCT 2127158 Query 378247 CTAGTTTTAACTGCAGTATCAATTAAACCAACACGACCACCCATTGCATGGAAGAATAAT 378306 ||| ||||| ||||||||||| | ||| |||||||| ||||||| || || || || Sbjct 2127159 GCAGTCTTAACCGCAGTATCAATCAGACCTTCACGACCAGCCATTGCGTGAAAAAAAAAC 2127218 Query 378307 TCAGTAGGAGTAAGTCCACCAATAAATGAACTCTCAATAAATCCTCTTGCGCCTGGCGAA 378366 || || || || || || | || | | || |||||| ||| ||||| | |||||||| Sbjct 2127219 TCTGTTGGGGTGAGACCTCTAAGATACGAGTTCTCAACAAAACCTCTCGATTCTGGCGAA 2127278 Query 378367 TCATCATATTTTGTATAATGAGGTAATGTACGATTCTCAAACCCATATGGAATTCGTTTT 378426 | ||| | || || |||| || | ||||||| || ||| || | ||||| ||||| Sbjct 2127279 TAATCGTCCTTGGTGAAATGTGGAAGAGTACGATACTTAAAACCGAAAGGAATACGTTTA 2127338 Query 378427 CCATCAACATTCTGTTGAC---CAAGTGCAGAAACCATTTGAGCAATATTTAAATCACTA 378483 || ||||| ||||||| | || ||||| ||| |||| |||||| | | | | Sbjct 2127339 CCTTCAACGGATTGTTGACCCACGAGGGCAGA---CATCTGAGAAATATTGATAGTAGAA 2127395 Query 378484 CCTTTAGACCCAG 378496 |||||||| |||| Sbjct 2127396 CCTTTAGAACCAG 2127408 Score = 111 bits (122), Expect = 5e-19 Identities = 506/784 (65%), Gaps = 25/784 (3%) Strand=Plus/Plus Query 349565 ATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACTGTA 349624 |||||||||||||| |||| | || || | | || || | || || || ||||| Sbjct 3296492 ATGAAGGAAATTGCCGAAGTCAAGTTGGGCAAGAAGGTCACAAAAGCCGTCATCACTGTC 3296551 Query 349625 CCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCGGGG 349684 ||||| || || || || ||| ||| || || || |||||||| || || || Sbjct 3296552 CCAGCTTACTTCAACGACAACCAACGTCAAGCTACCAAGGATGCTGGTGCAATCGCTGGT 3296611 Query 349685 TTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTTGAT 349744 | || || || | || ||||| || || || ||||| || ||||| || || |||| | Sbjct 3296612 CTTAACGTCCTCCGTATCATTAACGAGCCTACCGCTGCTGCCATTGCTTACGGTCTTGGT 3296671 Query 349745 AAAATGAGTGACCAAGaaaaa----aaTATTCTTATTTTTGATTTAGGTGGTGGTACTTT 349800 || | |||| ||| | || |||| || | ||| | |||||||| ||||| Sbjct 3296672 -GCTGGAAAGTCCAACAAAGAGCGTAACGTTCTCATCTACGATCTCGGTGGTGGAACTTT 3296730 Query 349801 TGATGTATCACTAC-TAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTG 349859 ||||| || || | ||||| | ||| || | || ||||| || ||||| |||| Sbjct 3296731 CGATGTTTCTCTTCTTAACA-TCCAAGGTGGTGTCTTCACTGTTAAGGCTACTGCCGGTG 3296789 Query 349860 ATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCG-TTTCGCATTTTGTTAAAGAA 349918 | || ||| | || || ||||||| ||| | | || | || ||| || || || Sbjct 3296790 ACACCCATTTGGGAGGTCAAGATTTCGAT-ACCAACTTGCTTGAGCACTTCAAGAAGGAG 3296848 Query 349919 TTTAAGCGTCAAGCTAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCGCCTAAGA 349978 || | | | | || | || || | |||| | || | ||||| || ||| Sbjct 3296849 TTCACCAGAAAGACCAAGAAGGACATGTCCAACGATCCCCGTGCCCTCCGTCGTCTTAGA 3296908 Query 349979 ACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTAC--TACCCAAACCTCTATTGAAA 350036 ||||| || |||||||||||| | | | || | || | || ||| |||| | Sbjct 3296909 ACTGCTTGCGAACGTGCTAAGAGAAC--TCTCTCCAACGGTGCCTCCACCAACGTTGAGA 3296966 Query 350037 TTGATTCTCTTGCT-GATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAA 350095 |||| || |||| | ||||| | || ||| | | || || ||||| | || ||| Sbjct 3296967 TTGACTC-CTTGTTCGATGGTGAGGACTTCAATGCTCAAATCACCCGTGCCAGATTCGAA 3297025 Query 350096 GA-ATTA--TGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAA 350152 || ||| | | || ||| | | || |||| ||||| | | || | || Sbjct 3297026 GACCTTAACTCCAAGG---CTTTCAACGGTACTTTGGAGCCTGTTGCTCAGGTTCTCAAG 3297082 Query 350153 GATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGT 350212 ||||| || | || | || ||||||| | ||| | |||||||||||||| ||| Sbjct 3297083 GATGCCAACCTTGATAAGAGCAAGGTTGATGAGATCGTTCTCGTTGGTGGTTCTACCCGT 3297142 Query 350213 ATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCA 350272 || |||| | ||||| || | | |||||| ||| |||| |||||| || ||| | Sbjct 3297143 ATCCCAAGAATTCAAAAGCTCTTGAGTGAGTTCTTTGATGG-AAAGAA-GTTGGAGAAGA 3297200 Query 350273 --ATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTG 350330 || || || ||||| |||||||| || ||||| ||||| || || ||| | || | Sbjct 3297201 GCATCAACCCTGATGAGGCTGTTGCCTACGGTGCCGCTGTCCAAGCTGGTATCCTTTCCG 3297260 Query 350331 GAAA 350334 |||| Sbjct 3297261 GAAA 3297264 Score = 87.8 bits (96), Expect = 5e-12 Identities = 111/152 (73%), Gaps = 3/152 (2%) Strand=Plus/Plus Query 377443 AATATTTCTTCAATGCGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCA 377502 || ||||| | || ||||| |||||| | ||||| ||| || |||| | ||||| Sbjct 2126331 AAAATTTCCTTAAGACGTGGAACACCAAGGGTAACGTTC---TTGGATGAGATACCAGTG 2126387 Query 377503 AAGTGGAAAGTATTAAGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATA 377562 || ||||| || || | || | ||| || | || |||||||| ||||| || |||| Sbjct 2126388 AAATGGAAGGTGTTCAAGGTCATTTGTGTGGCTGGTTCACCAATAGACTGTGCAGCAAGC 2126447 Query 377563 ACGCCAACCATTTCTCCAGGATTGACAATAGC 377594 || |||||||| || ||||||||||| | ||| Sbjct 2126448 ACACCAACCATCTCACCAGGATTGACCAAAGC 2126479 >seq15 Length=1659866 Score = 123 bits (136), Expect = 8e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569 ||||||||| | | || || | |||||||||||||| ||||| || || ||||| || Sbjct 675693 ACCACCACGGAGACGTAACACCAAGTGAAGAGTAGACTCCTTTTGGATGTTGTAATCGGA 675634 Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629 | || || |||||||| ||||| ||||| || ||||| | || || || || || || Sbjct 675633 AAGGGTGCGACCATCTTCGAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGGTCGGGTGG 675574 Query 140630 AATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAAC 140689 |||||| || || ||||| || || | || ||||| || || | || || | ||||| Sbjct 675573 AATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCAAC 675514 Query 140690 TTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || | || || || || || || || || || |||||||| Sbjct 675513 CTCGAGGGTGATGGTTTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 675466 >seq12 Length=1765576 Score = 102 bits (112), Expect = 2e-16 Identities = 130/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 140550 TTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATT 140609 ||||| || || ||||| || | || || || ||||| | ||| |||||||| ||||| Sbjct 99194 TTTTGGATGTTGTAATCTGAGAGAGTACGTCCGTCTTCCAATTGCTTTCCAGCGAAGATC 99135 Query 140610 AGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCA 140669 | |||||| ||||| ||||||||||| || || ||||| || || | || ||||| || Sbjct 99134 AAACGTTGTTGATCGGGAGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 99075 Query 140670 ATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAA 140728 || | || || | || || ||||| || | ||||| || || || || || || || Sbjct 99074 ATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGAA 99016 >seq5 Length=2273674 Score = 93.3 bits (102), Expect = 1e-13 Identities = 217/327 (66%), Gaps = 3/327 (1%) Strand=Plus/Plus Query 349562 AAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACT 349621 || ||||||||| | || ||| |||| | || | || || || | || ||| ||||| Sbjct 1575619 AAGATGAAGGAAGTCGCCGAATCATACCTCGGAAAGACTGTTACCCACGCAGTTGTTACT 1575678 Query 349622 GTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCG 349681 || ||||| || || || || ||| | || || || ||||| || | |||||| Sbjct 1575679 GTTCCAGCTTACTTCAACGACAACCAAAGACAAGCCACCAAGGATGCCGGTATCATTGCC 1575738 Query 349682 GGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTT 349741 || || || ||||| | || | || ||||| || || ||||| ||||| || || | Sbjct 1575739 GGTTTGAACGTTCTCCGTATCGTCAACGAACCTACCGCCGCAGCTATTGCCTACGGTTTG 1575798 Query 349742 GATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTT 349801 || || || ||| ||| | || || | | |||| | ||||| || || ||| Sbjct 1575799 GACAA---GACTGAAGGTGAACGTCAAATCATTGTCTATGATCTCGGTGGAGGAACCTTT 1575855 Query 349802 GATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGAT 349861 ||||| || || || | |||| || | ||||| ||| | ||||| ||||| Sbjct 1575856 GATGTTTCTCTTCTCTCCATTGATCGTGGTGTCTTTGAGGTTCTTTCTACTGCCGGTGAC 1575915 Query 349862 ACACATCTTGGTGGAGAAGATTTTGAT 349888 || || | || ||||||||||| ||| Sbjct 1575916 ACTCACTTGGGAGGAGAAGATTTCGAT 1575942 Score = 91.5 bits (100), Expect = 4e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 182904 TTTTCAAGTGCGCTAACATTTAAAATACCATTAGAGTCAACATCAAATGATACTTCAATC 182963 || ||| |||| |||| ||||| || || || | ||||| || || || || ||||| Sbjct 1576712 TTGTCACCTGCGGTAACCTTTAAGATTCCGTTGGCGTCAAGCTCGAAAGAAACCTCAATT 1576653 Query 182964 TGTGGAACACCTCGTGGCATTGGTGGAATTCCAGTTAAAGTAAATTCACCTAATTTATTA 183023 ||||||||||| ||||| ||||||||| || || || |||| ||| | || || Sbjct 1576652 TGTGGAACACCACGTGGTGCTGGTGGAATACCGGTCAACTCGAATTTACCGAGGTTGTTG 1576593 Query 183024 TTATCTTTAGTTCTTGCTCTCTCGCCTTCATATACTTGAATAGTAACTGCTGGCTGATTA 183083 || ||||| || ||| ||| || || || || ||||| || || |||| || ||| Sbjct 1576592 TTGTCTTTTGTCATTGTTCTTTCTCCCTCGTAGACTTGGATCAAGACAACTGGTTGGTTA 1576533 Query 183084 TCACTATAAGTAGAAAAAACTTG 183106 || |||||| |||| ||| Sbjct 1576532 TCGGCGGCAGTAGAGAAAATTTG 1576510 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515247216747110