Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq4 149 7e-31 seq7 102 9e-17 >seq4 Length=2560074 Score = 149 bits (164), Expect = 7e-31 Identities = 870/1384 (63%), Gaps = 46/1384 (3%) Strand=Plus/Plus Query 78534 GTAGATGTTGGTCGTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGA 78593 ||||||||| | ||||| ||||||||| |||||| || | || |||| || Sbjct 940264 GTAGATGTTTGAAGTGTAAGGCTCGAAACATTCGTTGAAGCCAAGAATTTGGGATGTGCT 940323 Query 78594 GGCGGTCGGCATGGGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGATCTCGAC 78653 || || ||||| ||||| || || ||||| || || | || || |||||| Sbjct 940324 AGCAGTAGGCATAGGTGCAACTAGGAGAGAGTTGCGGATTCCGTGTTGCTTGATGGATTG 940383 Query 78654 CTTTAGGCCGTCCCAA------AATTCATTCGCCGCGATCCCCCACATGTCCGGTTGAAG 78707 ||| | ||||||| || ||| | | | | ||||||||| || |||||| Sbjct 940384 CTTCAAAGAGTCCCAATCCCACAAATCAGTAGGTGTAACCCCCCACATATCGTATTGAAG 940443 Query 78708 GATACCCTCGGACGCCGGCGACCCCTTGA-ACGTCTCGTAAGATCCCTCCTCCTTGGCGA 78766 ||||| || | || || || |||| | || ||||| | || ||||| |||| Sbjct 940444 TTCACCCTTAGAGACTGGGGAGCC-TTGATAGGTTTCGTATGGGCCAAGTTCCTTTGCGA 940502 Query 78767 GTTCGCATGACTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCT 78826 ||| || | || ||| |||||||| | | |||||| || ||||||| | Sbjct 940503 TCTCGACGGAAGAGGTCAAGGCAGCGTGGTAGATGGTCTCGAAAATTTGTATGTTGAGGT 940562 Query 78827 CGCGCGCCTTGGTCTCGTCGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGCCCT 78886 || | | ||| || | ||| | || || ||| |||| || || || | Sbjct 940563 GTTTGGCTTCTGGGGAGTCAAATGGAAGACGAAGAGCCAAGAAAGCATCAGCAAGACCTT 940622 Query 78887 GGACGCCGATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGTCGGGT 78946 | || |||| ||||| ||||| || || | ||||| ||||||||| | || || | Sbjct 940623 GAACACCGACCGCGATAGGTCGATGACGGAAATTGCTTTTTCGGGCCTCTGCGACTGGAT 940682 Query 78947 AAAAGTTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACA 79006 | |||| || || | |||| ||| | || || | ||||||| | Sbjct 940683 AGTAGTTGATGTCAATAATCTTATTCAAGTTTCTAACAACAACTTGGACAACCTCGTGAA 940742 Query 79007 ATTTGGCGAAATCAAAA------TGATTTCCTTTGATGAAAGTCGGTAGGCACAGCGATG 79060 || ||||||| || | ||| |||| |||||| |||| ||||||| Sbjct 940743 GCTTTTGGAAATCATAAGTTCCCTCATTCATGTTGACGAAAGTTGGTAA----AGCGATG 940798 Query 79061 ----CCAGGTTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCAC 79116 ||| ||| || || ||| || || ||| ||||| |||||| |||||| Sbjct 940799 GAAGCCAAGTTACAGCAAGCAACCTCATCTGGTGCAGAGTACTCGACGATTTCCGTGCAC 940858 Query 79117 AAATTAGA----CGACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGC 79172 ||||| || ||| || || || | |||||| ||||||||||||| ||| || || Sbjct 940859 AAATTGGAGCTGCGA----ATAGTACCCAGGTTCTTTTGGTTGCTCTTCTTGTTGCATGC 940914 Query 79173 GTCCTTGTAGCACATGTACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCA 79232 |||||||| |||| | || | |||||||| ||| || |||| | || ||| Sbjct 940915 ATCCTTGTAAAGCATGAAAGGATTTCCGGTCTCGGTTTGAGCCTCAAGAATGGAGTACCA 940974 Query 79233 GATGTCCCGGGCCCGGACAACCTTCTTGTACCGACCCTG---TGCGA---CGTACGTCCG 79286 | | | ||| || | ||||| ||||||| ||| |||| | Sbjct 940975 AAGTTTTTGAGCCTTGATAG---TCTTG---CGACCCTTGCCTGCCTTTTCGTAACCCTC 941028 Query 79287 GTACAACTCGTTGAAAGCCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCA 79346 ||| | | | ||| |||| ||||| ||||| | | || || || |||| ||||| Sbjct 941029 GTAGAGAGCCTCGAACTCCTCGCCATAAACATCTGCTAAACCTGGACATTCGTTGGGGCA 941088 Query 79347 CATCAGGTGCCAGTCCTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAG 79406 ||| || ||| || | | ||| ||||| || |||||| || || || ||||||| Sbjct 941089 CATGAGAGTCCAATCTCCATTCTTTTCAACACGCTTCATGAATAGATCAGGAATCCACAA 941148 Query 79407 GGCCGTGAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAG 79466 ||| |||||| ||||| ||| | || || | ||| || || || || || || Sbjct 941149 GGCGTAGAAGAGATCGCGTGCACGAACTTCTTCCTTGCCATGATTTTTGCGTAGATCAAG 941208 Query 79467 AAAGTCCATGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTT 79526 || || | | || || ||||| ||||| || || | || || | ||| ||||| Sbjct 941209 GAACTCAAAAACATCCGCATGCCATGGCTCAAGGTAAACAGCAAAGGCACCAGGACGCTT 941268 Query 79527 GCCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGAT 79586 || || || | || || | ||| ||||||||||||||||||||||| || ||||| Sbjct 941269 ATTACCACCTTGATCAACATATCTGGCAGTGTTGTTGAAAACTCGGAGCATAGGAACGAT 941328 Query 79587 GCCGTCGGCGACGCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCA 79646 ||||| | | || || || ||| || || || | || || || | | | | Sbjct 941329 GCCGTTAGAGTTTCCATTGGTACCGGCTATGTATGCGCCAGTAGCACGGAT-TCGGTGAA 941387 Query 79647 -GTGGATTCCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGT 79705 | || || || || || | ||| ||||| || || ||| | || |||| Sbjct 941388 TATTGAGACCAATACCACCAGCATTCTTTGAGATCATAGCACAAATCTTCAAAGTATCGT 941447 Query 79706 AGATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGT 79765 | || || || || ||| |||||||| ||| |||||||| || | ||| | | Sbjct 941448 AAATACCATCAATACTGTCCTCCTTCATGTCGATAAGGAAGCATGATGAAAGTTGT-GCT 941506 Query 79766 TGT-TCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATC 79824 ||| ||||| || |||||| || |||| || || |||||| |||| | |||| Sbjct 941507 TGTGGAGTACCCGCAGAGAAGAGTGTTGGCGAGGCATGTGTGAAGTACTTGTTTGACATC 941566 Query 79825 AGATCGTACGTCTCCTTGACGCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGC 79884 | | ||| || || || | | | ||| || ||||| || || || || || ||| Sbjct 941567 AAGTTGTATGTTTCGATGGCACTTTCAATGTCATCACCGTGAATACCAACGGCAACACGC 941626 Query 79885 ATGA 79888 |||| Sbjct 941627 ATGA 941630 Score = 147 bits (162), Expect = 2e-30 Identities = 391/592 (66%), Gaps = 4/592 (1%) Strand=Plus/Minus Query 19116 TCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGCGAGACATACG 19175 ||||||| || || || || || || || || ||| | | | | ||| |||||| Sbjct 941630 TCATGCGTGTTGCCGTTGGTATTCACGGTGATGACATTGAAAGTGCCATCGAAACATACA 941571 Query 19176 ACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACGA 19235 || ||||| | |||| |||||| || || |||| || || ||| || ||||| Sbjct 941570 ACTTGATGTCAAACAAGTACTTCACACATGCCTCGCCAACACTCTTCTCTGCGGGTACTC 941511 Query 19236 -ACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGC 19294 |||| | || | || || ||||| | | |||||||| ||||| ||||| || Sbjct 941510 CACAAGCA-CAACTTTCATCATGCTTCCTTATCGACATGAAGGAGGACAGTATTGATGGT 941452 Query 19295 ATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGATC 19354 || ||||| || | ||| || || ||||| ||| | || ||||| || || Sbjct 941451 ATTTACGATACTTTGAAGATTTGTGCTATGATCTCAAAGAATGCTGGTGGTATTGGTCTC 941392 Query 19355 CAC-TGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCCGA 19413 | | | | | ||||| | | ||| || || || || || ||| | | Sbjct 941391 AATATTCACCGA-ATCCGTGCTACTGGCGCATACATAGCCGGTACCAATGGAAACTCTAA 941333 Query 19414 CGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGG 19473 ||| ||||| || |||||||| || ||||||||||| ||||| || || | || || || Sbjct 941332 CGGCATCGTTCCTATGCTCCGAGTTTTCAACAACACTGCCAGATATGTTGATCAAGGTGG 941273 Query 19474 CGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGA 19533 || || || | || || | ||||| ||||||||||| ||||| || | || Sbjct 941272 TAATAAGCGTCCTGGTGCCTTTGCTGTTTACCTTGAGCCATGGCATGCGGATGTTTTTGA 941213 Query 19534 TTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCAC 19593 ||||| || || ||| || || || | || || | || ||||| |||||| Sbjct 941212 GTTCCTTGATCTACGCAAAAATCATGGCAAGGAAGAAGTTCGTGCACGCGATCTCTTCTA 941153 Query 19594 GGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACCT 19653 |||||||||||||| || ||||||||| || ||||| ||| | | ||| ||| || Sbjct 941152 CGCCTTGTGGATTCCTGATCTATTCATGAAGCGTGTTGAAAAGAATGGAGATTGGACTCT 941093 Query 19654 GATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGTTC 19705 |||||||| ||||||| || || || | || || || ||||||| |||| Sbjct 941092 CATGTGCCCCAACGAATGTCCAGGTTTAGCAGATGTTTATGGCGAGGAGTTC 941041 >seq7 Length=2023280 Score = 102 bits (112), Expect = 9e-17 Identities = 110/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 59973 TTTGCACAACGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTC 60032 ||||| |||||||| | || || || ||| ||||| ||||| ||||| || || ||| Sbjct 1768119 TTTGCTCAACGTCTTGTCGCATTCGCTGCCGTTGAAGGTATCTTTTTCTCCGGATCCTTC 1768178 Query 60033 TGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAG 60092 |||| ||||||||||| |||||||| |||||| | || || | || || ||||| Sbjct 1768179 GCCTCTATCTTCTGGCTCAAGAAGCGTGGTCTCATGGCCGGACTCACCTTTTCAAACGAA 1768238 Query 60093 CTGATTTCCCGGGACGAGGGCCTCCA 60118 || || ||||| ||||| || ||||| Sbjct 1768239 CTCATCTCCCGTGACGAAGGTCTCCA 1768264 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548522263072800