Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq4 134 2e-26 >seq4 Length=2560074 Score = 134 bits (148), Expect = 2e-26 Identities = 390/593 (66%), Gaps = 8/593 (1%) Strand=Plus/Minus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACG 53252 ||||||| || ||| | ||||| |||||||| ||| ||| | || || ||| Sbjct 941630 TCATGCGTGTTGCCGTTGGTATTCACGGTGATGACATTGAAAGTGCCATCGAAACATACA 941571 Query 53253 ACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGA 53312 |||| ||| | |||||||| || || ||| ||||||| || ||| || ||||| Sbjct 941570 ACTTGATGTCAAACAAGTACTTCACACATGCCTCGCCAACACTCTTCTCTGCGGGTACTC 941511 Query 53313 ATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCA 53372 || | || | || |||||||| | | |||||||| ||| || || || | Sbjct 941510 CACAAGCACAACTTTCATCATGCTTCCTTATCGACATGAAGGAGGACAGTATTGATGGTA 941451 Query 53373 TCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCC 53432 | ||||| || | ||| ||||| ||||| ||| | |||||||| ||| || Sbjct 941450 TTTACGATACTTTGAAGATTTGTGCTATGATCTCAAAGAATGCTGGTGGTATTGGTCTCA 941391 Query 53433 AC--TGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGA 53490 | | |||| ||||||| | ||| || || || || || || | | | Sbjct 941390 ATATTCACCGAA--TCCGTGCTACTGGCGCATACATAGCCGGTACCAATGGAAACTCTAA 941333 Query 53491 TGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGG 53550 || ||||| ||||||||||| || ||||||||||| ||| | || || | || ||||| Sbjct 941332 CGGCATCGTTCCTATGCTCCGAGTTTTCAACAACACTGCCAGATATGTTGATCAAGGTGG 941273 Query 53551 TGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGA 53610 | ||||| || | || || | ||||| ||||| ||||| || || || | || Sbjct 941272 TAATAAGCGTCCTGGTGCCTTTGCTGTTTACCTTGAGCCATGGCATGCGGATGTTTTTGA 941213 Query 53611 GTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGTT-T 53668 ||| || || || || ||||| || | ||||| | || ||| || || || || | Sbjct 941212 GTTCCTTGATCTACGCAAAAATCATGGCAAGGAAGAAGTTCG-TGCACGCGATCTCTTCT 941154 Query 53669 ACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTAC 53728 || || |||||||||| || || |||||| | || || ||| | | || ||| Sbjct 941153 AC-GCCTTGTGGATTCCTGATCTATTCATGAAGCGTGTTGAAAAGAATGGAGATTGGACT 941095 Query 53729 CTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTT 53781 || |||||||| ||||| || || || | | ||| || || |||||||| Sbjct 941094 CTCATGTGCCCCAACGAATGTCCAGGTTTAGCAGATGTTTATGGCGAGGAGTT 941042 Score = 86.0 bits (94), Expect = 7e-12 Identities = 140/198 (71%), Gaps = 4/198 (2%) Strand=Plus/Minus Query 55728 TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACA--GAAGAGTCTGATTGACATGAG 55785 |||||| ||||| ||| || ||||| || | || ||| | | || || | ||| Sbjct 940112 TCAAGGCTCTTTACAAGACTGTTTGGGAAATCTCTCAACGAACAAT-TG-TTCAAATGGC 940055 Query 55786 TGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCC 55845 ||||||||||||||| | |||||| || || || || ||||||| |||| || |||| Sbjct 940054 TGCTGATCGTGGTGCATTCATCGATCAATCTCAATCAATGAACATTCACATGAAGGATCC 939995 Query 55846 TTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGG 55905 | || ||| |||| | | || ||||| ||| || ||||| ||| | ||||| || Sbjct 939994 TACAATGGGCAAGATTACATCCATGCATTTTGCTGGTTGGAAATTGGGTTTGAAGACCGG 939935 Query 55906 TATGTACTATCTGCGGAC 55923 ||||||||| | || || Sbjct 939934 AATGTACTATTTACGTAC 939917 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547213469126000