Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq15 167 3e-36 seq1 167 3e-36 seq4 161 1e-34 seq7 136 5e-27 seq12 131 2e-25 >seq15 Length=1659866 Score = 167 bits (184), Expect = 3e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || || ||||| || || || || ||||||||||| Sbjct 675466 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAAACCATCACCCTCGAGGTTGAGTCTTCC 675525 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| | ||| | || || |||||||||||||||||||| || ||||| Sbjct 675526 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCACCCGACCAA 675585 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| | || || || || ||||||||||| |||| ||| ||||| | || || || Sbjct 675586 CAGCGATTGATCTTCGCCGGAAAGCAACTCGAAGATGGTCGCACCCTTTCCGATTACAAC 675645 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||||||||| || |||||||| | || || ||||| || ||||| Sbjct 675646 ATCCAAAAGGAGTCTACTCTTCACTTGGTGTTACGTCTCCGTGGTGG 675692 >seq1 Length=3544467 Score = 167 bits (184), Expect = 3e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| |||||||| ||||| || ||| | |||||||| ||| Sbjct 2378086 ATGCAGATTTTCGTCAAGACCCTTACCGGAAAGACAATCACTTTGGAGGTTGAATCATCG 2378027 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | ||| ||||| | || || || || |||||||| || || || || || Sbjct 2378026 GATACCATCGACAATGTGAAGTCGAAGATCCAAGATAAGGAGGGTATCCCACCCGATCAA 2377967 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||||| || ||||||||||||||||| ||||| | |||||| || | || || || Sbjct 2377966 CAACGTCTTATCTTTGCTGGTAAGCAACTTGAGGACGGTCGTACACTTTCGGATTACAAC 2377907 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | ||||||||||| ||| | ||| | ||| | ||||| || ||||| Sbjct 2377906 ATTCAAAAGGAATCGACTTTACATTTGGTCCTTCGTCTCCGTGGTGG 2377860 Score = 136 bits (150), Expect = 5e-27 Identities = 152/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 ||||| ||||| ||||| || ||||||||||| | || | ||| | || | ||| | Sbjct 2378572 ACCGGTAAGACCATTACCCTCGAGGTTGAGTCCAGCGACACCATCGACAACGTCAAGTCC 2378513 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || || ||||||||||||||||||||||| ||||| |||||| | || || || || || Sbjct 2378512 AAGATCCAGGACAAGGAGGGAATTCCTCCCGACCAACAGCGTTTGATCTTCGCCGGAAAA 2378453 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 ||||| || |||| ||| ||| | ||||| || |||| ||||| |||||||| || Sbjct 2378452 CAACTTGAAGATGGTCGCACCTTGAGTGACTACAACATCCAGAAGGAGTCCACTCTCCAC 2378393 Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632 | ||| | | ||||| ||||| Sbjct 2378392 TTGGTCCTCAGACTTCGTGGTGG 2378370 Score = 131 bits (144), Expect = 2e-25 Identities = 185/260 (71%), Gaps = 5/260 (2%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||||||||||||||| | || |||||||| ||||| | || || || || Sbjct 2377858 ATGCAAATCTTTGTCAAGACCTTGACTGGCAAGACAATTACATTAGAAGTGGAATCGTCA 2377799 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||||| ||| | || | || ||||||||||||||||| ||||| || || || Sbjct 2377798 GATACCATTGATAATGTTAAATCAAAGATTCAGGACAAGGAGGGCATTCCACCTGATCAA 2377739 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || || | || ||||| || ||||| | ||||| | | ||||| | || || ||| Sbjct 2377738 CAACGATTGATCTTTGCAGGAAAGCAGTTGGAGGACGGCAGAACCCTTTCGGATTACAAT 2377679 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACAA-----GTTT 27640 | ||||||||| ||| | || | || | |||||||| ||||| ||| |||| Sbjct 2377678 ATTCAAAAGGAAAGCACCTTGCACTTGGTGCTCCGTCTTCGTGGTGGTCAATAGATGTTT 2377619 Query 27641 AAAGTTTTTCCTGCACATAT 27660 |||| |||||||||| Sbjct 2377618 TCGGTTTGATCTGCACATAT 2377599 >seq4 Length=2560074 Score = 161 bits (178), Expect = 1e-34 Identities = 527/812 (65%), Gaps = 35/812 (4%) Strand=Plus/Plus Query 80948 ACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTG 81007 ||||||||||||||||||||||||| || ||| ||||||||||| || ||||| Sbjct 940839 ACTCGACGATTTCCGTGCACAAATTGGAGCTGCGAATAGTACCCAGGTTCTTTTGGTTGC 940898 Query 81008 ACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACT 81067 ||| |||||| || |||||||| |||| | || | ||||||||| || | || Sbjct 940899 TCTTCTTGTTGCATGCATCCTTGTAAAGCATGAAAGGATTTCCGGTCTCGGTTTGAGCCT 940958 Query 81068 TGAGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCA 81127 || |||| || ||||| | | ||||||| |||||| |||||| | Sbjct 940959 CAAGAATGGAGTACCAAAGTTTTTGAGCCTTGATAGTCTTGCGACCCTTGCCTGC----- 941013 Query 81128 CATACTTGGCGTAAGCTTCG---------TCGAACTTGGCACCGTGAAGTTCAGTGAGGT 81178 ||| ||||| | ||| ||||||| | || | || || | | Sbjct 941014 ----CTTTTCGTAACCCTCGTAGAGAGCCTCGAACTCCTCGCCATAAACATCTGCTAAAC 941069 Query 81179 CTGGGCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGA 81238 |||| || ||||| |||||||| || ||| || | || || ||| |||||||| Sbjct 941070 CTGGACATTCGTTGGGGCACATGAGAGTCCAATCTCCATTCTTTTCAACACGCTTCATGA 941129 Query 81239 AAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCG-GCAGCGCGCCTCCTCATCACCC 81297 | ||||| ||||| | |||| ||| || ||||| ||| || | || || | || Sbjct 941130 ATAGATCAGGAATCCACAAGGCGTAGAAGAGATCGCGTGCA-CGAACTTCTTCCTTGCCA 941188 Query 81298 TGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACG 81357 || || ||| | || || || || | | ||||||||||||||||| || || || Sbjct 941189 TGATTTTTGCGTAGATCAAGGAACTCAAAAACATCCGCATGCCATGGCTCAAGGTAAACA 941248 Query 81358 GCGATCGACCCCTTGCG---ACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAAT 81414 || | | || || | ||||| || | || || | |||||| ||| || Sbjct 941249 GCAAAGGCACCAGGACGCTTATTACCACCTTGATCAACATATCTGGCAGTGTTGTTGAAA 941308 Query 81415 ACACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGA--TACGCGACC 81472 || || | |||||| | ||| || | || | || || ||||| | | || ||| | Sbjct 941309 ACTCGGAGCATAGGAACGATGCCGTTAGAGTTTCCATTGGTACCGGCTATGTATGCG--C 941366 Query 81473 CCTTGGCGCGCA--CCTTGCTGATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTG 81530 | | || || | | || |||| ||||| || ||||| | |||||| ||| Sbjct 941367 CAGTAGCACGGATTCGGTGAATATTG--AGACCAATACCACCAGCATTCTTTGAGATCAT 941424 Query 81531 AGCACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAA 81590 |||||| |||| || || ||||| || || || || || | |||||||| | | Sbjct 941425 AGCACAAATCTTCAAAGTATCGTAAATACCATCAATACTGTCCTCCTTCATGTCGATAAG 941484 Query 81591 GAAACAGCTTGACATCTGAGGGCTTTTTGAG--CCGGCATTGAACAGTGTTGGGGTCGCG 81648 ||| || ||| | | | |||| | ||| || ||| ||| |||||||| | || Sbjct 941485 GAAGCATGATGAAAGTT--GTGCTTGTGGAGTACCCGCAGAGAAGAGTGTTGGCGAGGCA 941542 Query 81649 TGAATGAAATAACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCA 81708 || |||| || ||||||||||| || || ||||| || | | | ||| || ||| Sbjct 941543 TGTGTGAAGTACTTGTTTGACATCAAGTTGTATGTTTCGATGGCACTTTCAATGTCATCA 941602 Query 81709 CCGTGAATACCGATAGCTACACGCATAAACAT 81740 ||||||||||| | || |||||||| | ||| Sbjct 941603 CCGTGAATACCAACGGCAACACGCATGATCAT 941634 >seq7 Length=2023280 Score = 136 bits (150), Expect = 5e-27 Identities = 309/459 (67%), Gaps = 12/459 (3%) Strand=Plus/Plus Query 64708 TTTGGTCAGCGTCTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTC 64767 |||| ||| ||||| | || || || || ||||| || || || || || || ||| Sbjct 1768119 TTTGCTCAACGTCTTGTCGCATTCGCTGCCGTTGAAGGTATCTTTTTCTCCGGATCCTTC 1768178 Query 64768 TGTTCTATTTTCTGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAG 64827 ||||| |||||||| || ||||| || || ||| | || || | ||||| ||||| Sbjct 1768179 GCCTCTATCTTCTGGCTCAAGAAGCGTGGTCTCATGGCCGGACTCACCTTTTCAAACGAA 1768238 Query 64828 CTGATCTCTCGGGACGAGGGGCTCCACCAAGAATTTGCGGTTACCCTGTTCAGCCACCTC 64887 || ||||| || ||||| || |||||| || || || ||| ||| ||| ||| Sbjct 1768239 CTCATCTCCCGTGACGAAGGTCTCCACACCGATTTCGCATGCCTCCTCTTCTCCCATCTC 1768298 Query 64888 AAGGACAAACCATCACATGGGA-CTATAATTGATATAGTAAAATCGGCTGTAGAAATTGA 64946 ||| || ||||| || | | || | || | | | ||| || | ||| || Sbjct 1768299 AAGCACCGCCCATC-CAAGCAAGCTGTCCAAGACGTCATCACCGAGGCCGTCGCAATCGA 1768357 Query 64947 AAAGGAATTCATTACTGCCGCGCTTCCGTGTCGTCTCATCGGCATGGATGCCGATAAGAT 65006 | |||||| | || | || ||||| ||| ||| | |||||| | || || Sbjct 1768358 GCAAGAATTCTTGACCGAGGCTCTTCCTTGTGCTCTTCTAGGCATGAACTCCACCCTCAT 1768417 Query 65007 GAAACAGTATATCGAATTTGTAGCAGATCGCCTGCTTACTCAGTTTGGT-----ATTAAG 65061 ||| ||||| |||||||| || || ||||| || || | || ||||| | ||| Sbjct 1768418 GAAGCAGTACATCGAATTCGTTGCTGATCGTCTCCTCA-TCGCTTTGGGCAACGACAAAG 1768476 Query 65062 CCCTACTGGAATTCTTCAAATCCATTTGACTGGATGGAGACGATCAGCCTGGAGGGGAAG 65121 | ||| || ||| | ||||||||||||| ||||||| || | ||| || ||| Sbjct 1768477 TC-TAC---AAATCTGCCAATCCATTTGACTTCATGGAGAATATTTCCTTGGCCGGCAAG 1768532 Query 65122 ACTAACTTTTTTGAAAAGAGGGTAGGTGATTACTCAAAG 65160 ||||||||||| |||||||| || ||||||||| |||| Sbjct 1768533 ACTAACTTTTTCGAAAAGAGAGTTGGTGATTACCAAAAG 1768571 >seq12 Length=1765576 Score = 131 bits (144), Expect = 2e-25 Identities = 138/182 (76%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473 ||| |||||||| ||||| |||||||| || || |||||||| ||||| || | ||| Sbjct 99015 CTTCGTCAAGACCCTTACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACCAT 99074 Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533 | ||| | ||| | || || ||||||||||||||||||||||| || || || ||| | Sbjct 99075 CGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCTCCCGATCAACAACGTTT 99134 Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAA 27593 || || ||||| |||||| | || || | ||||| || |||| || || ||||||| Sbjct 99135 GATCTTCGCTGGAAAGCAATTGGAAGACGGACGTACTCTCTCAGATTACAACATCCAAAA 99194 Query 27594 GG 27595 || Sbjct 99195 GG 99196 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570307762314400