Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017-
05-31] 370 sequences; 44,096,448 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq15 116 2e-21
seq1 111 1e-19
seq12 84.2 1e-11
>seq15
Length=1659866
Score = 116 bits (128), Expect = 2e-21
Identities = 106/134 (79%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| |||||||| || ||||| ||||||||| ||||| ||||| ||||| || ||
Sbjct 675683 AGACGTAACACCAAGTGAAGAGTAGACTCCTTTTGGATGTTGTAATCGGAAAGGGTGCGA 675624
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| ||||| ||||| || ||||| || || || ||||||||||| || || | |||||||
Sbjct 675623 CCATCTTCGAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGGTCGGGTGGAATTCCCTCC 675564
Query 34609 TTGTCTGTGATCTT 34622
||||| ||||||
Sbjct 675563 TTGTCCTGGATCTT 675550
>seq1
Length=3544467
Score = 111 bits (122), Expect = 1e-19
Identities = 165/229 (72%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || | |||||| | |||||| || | ||||| ||||||||||| || ||||| |||
Sbjct 2377632 CCACCACGAAGACGGAGCACCAAGTGCAAGGTGCTTTCCTTTTGAATATTGTAATCCGAA 2377691
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| |||| |||| || | || || || ||||| || || || ||||| || || ||
Sbjct 2377692 AGGGTTCTGCCGTCCTCCAACTGCTTTCCTGCAAAGATCAATCGTTGTTGATCAGGTGGA 2377751
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCT-TCGCTCTCCA 34657
| ||||||||||| ||| |||| |||||| || ||| || ||| || | ||||
Sbjct 2377752 ATGCCCTCCTTGTC-CTGAATCTTTGATTTAACATTATCAATGGTATCTGACGAT-TCCA 2377809
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|||| | || || || || || || || || || ||||| || |||||
Sbjct 2377810 CTTCTAATGTAATTGTCTTGCCAGTCAAGGTCTTGACAAAGATTTGCAT 2377858
Score = 107 bits (118), Expect = 1e-18
Identities = 104/134 (78%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| | |||||||| | ||| |||||||||||||| ||||| |||||||| ||
Sbjct 2377869 AGACGAAGGACCAAATGTAAAGTCGATTCCTTTTGAATGTTGTAATCCGAAAGTGTACGA 2377928
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
|||| |||||||| ||||| ||||| || | ||| ||||| || || || | ||||||
Sbjct 2377929 CCGTCCTCAAGTTGCTTACCAGCAAAGATAAGACGTTGTTGATCGGGTGGGATACCCTCC 2377988
Query 34609 TTGTCTGTGATCTT 34622
|| ||| ||||||
Sbjct 2377989 TTATCTTGGATCTT 2378002
Score = 102 bits (112), Expect = 5e-17
Identities = 100/127 (79%), Gaps = 4/127 (3%)
Strand=Plus/Plus
Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATC--TGAAAGTGTTCGCTCGTCTT 34555
||||| ||||||||| |||||| || ||||| || || | || ||| || | ||||
Sbjct 2378388 ACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCACTCAAGGTG--CGACCATCTT 2378445
Query 34556 CAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTG 34615
|||||||||| ||||| || || |||||||||||||| || || | ||||||||||||
Sbjct 2378446 CAAGTTGTTTTCCGGCGAAGATCAAACGCTGTTGGTCGGGAGGAATTCCCTCCTTGTCCT 2378505
Query 34616 TGATCTT 34622
||||||
Sbjct 2378506 GGATCTT 2378512
Score = 86.0 bits (94), Expect = 4e-12
Identities = 94/125 (75%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557
||||| || || || ||| || || || |||||||| ||||| || || | |||||
Sbjct 2378106 ACCAAGTGAAGGGTAGACTCTTTCTGGATATTATAATCGGAAAGGGTGCGACCATCTTCC 2378165
Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617
||||| || ||||| || || |||||||||||||| || || | || |||||||||
Sbjct 2378166 AGTTGCTTTCCGGCGAAAATCAAACGCTGTTGGTCGGGAGGAATGCCTTCCTTGTCTTGA 2378225
Query 34618 ATCTT 34622
|||||
Sbjct 2378226 ATCTT 2378230
>seq12
Length=1765576
Score = 84.2 bits (92), Expect = 1e-11
Identities = 82/106 (77%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 34517 CCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATA 34576
||||||| ||||| |||||||| || || || ||||||| | ||| || || || || |
Sbjct 99196 CCTTTTGGATGTTGTAATCTGAGAGAGTACGTCCGTCTTCCAATTGCTTTCCAGCGAAGA 99137
Query 34577 TTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTT 34622
| ||||| ||||| || || || | |||||||||||| ||||||
Sbjct 99136 TCAAACGTTGTTGATCGGGAGGAATTCCCTCCTTGTCCTGGATCTT 99091
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314728180766210
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |