Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017-
05-31] 370 sequences; 44,096,448 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq1 140 3e-28
seq15 136 3e-27
seq12 102 7e-17
>seq1
Length=3544467
Score = 140 bits (154), Expect = 3e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || ||||| || || |||| |||||| | ||||| | ||||||||| ||||
Sbjct 2377858 ATGCAAATCTTTGTCAAGACCTTGACTGGCAAGACAATTACATTAGAAGTGGAATCGTCA 2377799
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | ||||| | || ||| ||| ||||| ||||| || ||||| ||||| ||||||
Sbjct 2377798 GATACCATTGATAATGTTAAATCAAAGATTCAGGACAAGGAGGGCATTCCACCTGATCAA 2377739
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| || || || | || || || || ||||| ||| | ||| |||| ||||||||
Sbjct 2377738 CAACGATTGATCTTTGCAGGAAAGCAGTTGGAGGACGGCAGAACCCTTTCGGATTACAAT 2377679
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
||||||||||| ||||| || ||||| | ||| | || |||||
Sbjct 2377678 ATTCAAAAGGAAAGCACCTTGCACTTGGTGCTCCGTCTTCGTGGTGG 2377632
Score = 132 bits (146), Expect = 4e-26
Identities = 151/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 26994 ATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCG 27053
||| | || || ||||| ||||| ||| | || || ||||| || ||| | || ||| |
Sbjct 2378308 ATAGTCGTTAAGACTCTTACCGGAAAGACCATCACCCTTGAGGTCGAATCTTCAGACACC 2378249
Query 27054 ATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGT 27113
|| || | || || || ||||||||||| |||||||| || ||||| |||||||||
Sbjct 2378248 ATCGACAACGTTAAGTCTAAGATTCAAGACAAGGAAGGCATTCCTCCCGACCAACAGCGT 2378189
Query 27114 TTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAA 27173
|| || | |||||| || ||| ||||||| || ||| |||||||||| || || ||
Sbjct 2378188 TTGATTTTCGCCGGAAAGCAACTGGAAGATGGTCGCACCCTTTCCGATTATAATATCCAG 2378129
Query 27174 AAGGAGTCGACCTTACATTTGGT 27196
|| ||||| ||| | || |||||
Sbjct 2378128 AAAGAGTCTACCCTTCACTTGGT 2378106
Score = 127 bits (140), Expect = 2e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || || ||||| ||| | || ||| | || || ||| | ||
Sbjct 2378086 ATGCAGATTTTCGTCAAGACCCTTACCGGAAAGACAATCACTTTGGAGGTTGAATCATCG 2378027
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | || || | || || || || ||||| || || || || ||||||||||||
Sbjct 2378026 GATACCATCGACAATGTGAAGTCGAAGATCCAAGATAAGGAGGGTATCCCACCCGATCAA 2377967
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| ||| | || | || || || ||| | || ||| || || |||| |||||||||
Sbjct 2377966 CAACGTCTTATCTTTGCTGGTAAGCAACTTGAGGACGGTCGTACACTTTCGGATTACAAC 2377907
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||||||||| ||||| ||||||||||| | ||| | || ||||| ||
Sbjct 2377906 ATTCAAAAGGAATCGACTTTACATTTGGTCCTTCGTCTCCGTGGTGGTAT 2377857
Score = 89.7 bits (98), Expect = 4e-13
Identities = 132/187 (71%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 27010 TGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAAC 27069
||||||| ||| | ||||| || || || || | |||| | || || | |||||
Sbjct 2378574 TGACCGGTAAGACCATTACCCTCGAGGTTGAGTCCAGCGACACCATCGACAACGTCAAGT 2378515
Query 27070 AAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCA 27129
|| || || ||||| || || || || ||||| ||||||||||| || | |||||| |
Sbjct 2378514 CCAAGATCCAGGACAAGGAGGGAATTCCTCCCGACCAACAGCGTTTGATCTTCGCCGGAA 2378455
Query 27130 AACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTAC 27189
||||| | ||||| || ||| | || |||||||| || |||||||| || | |
Sbjct 2378454 AACAACTTGAAGATGGTCGCACCTTGAGTGACTACAACATCCAGAAGGAGTCCACTCTCC 2378395
Query 27190 ATTTGGT 27196
| |||||
Sbjct 2378394 ACTTGGT 2378388
>seq15
Length=1659866
Score = 136 bits (150), Expect = 3e-27
Identities = 167/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| || || || || || || ||||| | || || || || || || | ||
Sbjct 675465 CATGCAGATCTTCGTCAAGACCCTCACGGGCAAAACCATCACCCTCGAGGTTGAGTCTTC 675524
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
|||| | || || | ||||| || || || ||||| || || || |||||||| ||
Sbjct 675525 CGACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCACCCGACCA 675584
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
|||||| || || | |||||| || ||| | ||||| || ||| |||||||||||||
Sbjct 675585 ACAGCGATTGATCTTCGCCGGAAAGCAACTCGAAGATGGTCGCACCCTTTCCGATTACAA 675644
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
||| ||||||||||| || | || ||||| || ||| | || |||||
Sbjct 675645 CATCCAAAAGGAGTCTACTCTTCACTTGGTGTTACGTCTCCGTGGTGG 675692
>seq12
Length=1765576
Score = 102 bits (112), Expect = 7e-17
Identities = 131/181 (72%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 26997 TTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATT 27056
|| || || || || || |||||| | || || ||||| || || | |||||| | ||
Sbjct 99016 TTCGTCAAGACCCTTACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACCATC 99075
Query 27057 GAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTA 27116
|| | ||||| || || || ||||| || || || || ||||||||||| |||||
Sbjct 99076 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCTCCCGATCAACAACGTTTG 99135
Query 27117 ATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAG 27176
|| | ||| || || |||||||||||| | || | || ||||||||||| ||||||
Sbjct 99136 ATCTTCGCTGGAAAGCAATTGGAAGACGGACGTACTCTCTCAGATTACAACATCCAAAAG 99195
Query 27177 G 27177
|
Sbjct 99196 G 99196
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434916388502400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |