Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq15 118 7e-22 seq1 113 3e-20 seq12 87.8 1e-12 >seq15 Length=1659866 Score = 118 bits (130), Expect = 7e-22 Identities = 156/214 (73%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || ||||||||||| ||||| ||||| ||||| ||||| || | Sbjct 675466 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAAACCATCACCCTCGAGGTTGAGTCTTCC 675525 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || | || | | ||||| || || | || || || || Sbjct 675526 GACACCATCGACAATGTCAAGTCCAAGA-TCCAGGACAAGGAGGGAATTCCACCCGACCA 675584 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| || || || ||||| || ||||| ||||| | ||||| | ||||||||| Sbjct 675585 ACAGCGATTGATCTTCGCCGGAAAGCAACTCGAAGATGGTCGCACCCTTTCCGATTACAA 675644 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTA 23823 ||| ||||| ||||| || | || || || ||| Sbjct 675645 CATCCAAAAGGAGTCTACTCTTCACTTGGTGTTA 675678 >seq1 Length=3544467 Score = 113 bits (124), Expect = 3e-20 Identities = 155/212 (73%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || ||||| || ||||| || |||||| | || ||||| || || Sbjct 2378086 ATGCAGATTTTCGTCAAGACCCTTACCGGAAAGACAATCACTTTGGAGGTTGAATCATCG 2378027 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || | || ||| | || | || | | || || || ||| | || || ||||| Sbjct 2378026 GATACCATCGACAATGTGAAGTCGAAGA-TCCAAGATAAGGAGGGTATCCCACCCGATCA 2377968 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACG--CACTTTAGGCGATTAC 23787 ||| ||| | || ||||| || || ||||| || |||| || |||||| || ||||| Sbjct 2377967 ACAACGTCTTATCTTTGCTGGTAAGCAACTTGAGGACGGTCGTACACTTTCGG--ATTAC 2377910 Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGT 23819 ||||| ||||| || || || |||||||| || Sbjct 2377909 AACATTCAAAAGGAATCGACTTTACATTTGGT 2377878 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/188 (72%), Gaps = 2/188 (1%) Strand=Plus/Minus Query 23621 TCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTTG 23680 ||||||| || || || ||||| || ||||| || || || || || | ||||| | | Sbjct 2378304 TCGTTAAGACTCTTACCGGAAAGACCATCACCCTTGAGGTCGAATCTTCAGACACCATCG 2378245 Query 23681 A-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTA 23739 | || |||| | || | || ||||| ||||| | || || || ||||||||||| Sbjct 2378244 ACAACGTTAAGTCTAAGA-TTCAAGACAAGGAAGGCATTCCTCCCGACCAACAGCGTTTG 2378186 Query 23740 ATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAAA 23799 || || ||||| || ||||||||||| | ||||| | |||||| || || || ||| Sbjct 2378185 ATTTTCGCCGGAAAGCAACTGGAAGATGGTCGCACCCTTTCCGATTATAATATCCAGAAA 2378126 Query 23800 GAGTCCAC 23807 ||||| || Sbjct 2378125 GAGTCTAC 2378118 Score = 82.4 bits (90), Expect = 5e-11 Identities = 122/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 23635 ACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTTGAAATATTAAAACAA 23694 || || || || || || ||||| ||||| |||| ||||| | || | | || Sbjct 2378572 ACCGGTAAGACCATTACCCTCGAGGTTGAGTCCAGCGACACCATCGACAACGTCAAGTCC 2378513 Query 23695 AAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAA 23754 || || ||||| || || | || || || ||||||||||| || || ||||| ||| Sbjct 2378512 AAGATCCAGGACAAGGAGGGAATTCCTCCCGACCAACAGCGTTTGATCTTCGCCGGAAAA 2378453 Query 23755 CAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAAAGAGTCCAC 23807 ||||| ||||| | ||||| || | || |||||||| || || |||||||| Sbjct 2378452 CAACTTGAAGATGGTCGCACCTTGAGTGACTACAACATCCAGAAGGAGTCCAC 2378400 >seq12 Length=1765576 Score = 87.8 bits (96), Expect = 1e-12 Identities = 129/180 (72%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 23620 TTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTT 23679 ||||| || ||||| ||||| || || ||||| || || || || ||| | ||||| | Sbjct 99016 TTCGTCAAGACCCTTACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACCATC 99075 Query 23680 GA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTT 23738 || ||| | || | || | | ||||| || || | || || |||||||| ||||| Sbjct 99076 GACAATGTCAAGTCCAAGA-TCCAGGACAAGGAGGGAATTCCTCCCGATCAACAACGTTT 99134 Query 23739 AATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAA 23798 || || || || || ||| ||||||||| ||| ||| | ||||||||||| ||||| Sbjct 99135 GATCTTCGCTGGAAAGCAATTGGAAGACGGACGTACTCTCTCAGATTACAACATCCAAAA 99194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338008075787960