Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017-
05-31] 370 sequences; 44,096,448 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq1 149 1e-30
seq15 138 3e-27
seq12 125 2e-23
seq4 100 7e-16
seq9 95.1 3e-14
>seq1
Length=3544467
Score = 149 bits (164), Expect = 1e-30
Identities = 157/207 (76%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||||||||| ||||| | ||| || || || ||||| |||| ||| ||||||| | ||
Sbjct 2378093 ACGAAGTCTGAGGACCAAGTGAAGGGTAGACTCTTTCTGGATATTATAATCGGAAAGGGT 2378152
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| |||||||| || ||||| || ||||| || | || ||||||||||| ||||| ||
Sbjct 2378153 GCGACCATCTTCCAGTTGCTTTCCGGCGAAAATCAAACGCTGTTGGTCGGGAGGAATGCC 2378212
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||||||||| ||||| ||| || |||||||||||||| | ||| || || |
Sbjct 2378213 TTCCTTGTCTTGAATCTTAGACTTAACGTTGTCGATGGTGTCTGAAGATTCGACCTCAAG 2378272
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTT 225698
||||| ||||| || || | ||| ||
Sbjct 2378273 GGTGATGGTCTTTCCGGTAAGAGTCTT 2378299
Score = 131 bits (144), Expect = 4e-25
Identities = 156/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| | || | ||| ||||| ||||| | |||||||| | | || | || ||
Sbjct 2377875 AGGACCAAATGTAAAGTCGATTCCTTTTGAATGTTGTAATCCGAAAGTGTACGACCGTCC 2377934
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| || ||||| ||||| |||||||| |||||||| ||||| || ||||| ||||| |||
Sbjct 2377935 TCAAGTTGCTTACCAGCAAAGATAAGACGTTGTTGATCGGGTGGGATACCCTCCTTATCT 2377994
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||||||| |||||||| || || | ||| || || || ||||| |||
Sbjct 2377995 TGGATCTTCGACTTCACATTGTCGATGGTATCCGATGATTCAACCTCCAAAGTGATTGTC 2378054
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| || || | || || | ||| | |||||
Sbjct 2378055 TTTCCGGTAAGGGTCTTGACGAAAATCTGCAT 2378086
Score = 131 bits (144), Expect = 4e-25
Identities = 149/200 (75%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||||||||| ||||| | |||||||||||| || || |||| ||||| || ||| ||
Sbjct 2378375 ACGAAGTCTGAGGACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCACTCAAGGT 2378434
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| |||||||| || || || || |||||||| | || ||||||||||| ||||| ||
Sbjct 2378435 GCGACCATCTTCAAGTTGTTTTCCGGCGAAGATCAAACGCTGTTGGTCGGGAGGAATTCC 2378494
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||||| |||||||| ||| || ||||||||||| || || || || |
Sbjct 2378495 CTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGCTGGACTCAACCTCGAG 2378554
Query 225672 CGTGATCGTCTTGCCCGTCA 225691
|| || ||||| || ||||
Sbjct 2378555 GGTAATGGTCTTACCGGTCA 2378574
>seq15
Length=1659866
Score = 138 bits (152), Expect = 3e-27
Identities = 153/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 225510 GTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTG 225569
||| ||||| || || ||||||| |||||||||| | || | |||||||| || ||
Sbjct 675669 GTGAAGAGTAGACTCCTTTTGGATGTTGTAATCGGAAAGGGTGCGACCATCTTCGAGTTG 675610
Query 225570 CTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTT 225629
||| || |||||||| | ||| ||||||||||| ||||| || |||||||| ||||||||
Sbjct 675609 CTTTCCGGCGAAGATCAATCGCTGTTGGTCGGGTGGAATTCCCTCCTTGTCCTGGATCTT 675550
Query 225630 TTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689
||| ||| ||||||||||| || | || || || | ||||| || ||||||||
Sbjct 675549 GGACTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATGGTTTTGCCCGT 675490
Query 225690 CAAAGTTTTTATGAACACTTGCAT 225713
| || || | ||| | |||||
Sbjct 675489 GAGGGTCTTGACGAAGATCTGCAT 675466
>seq12
Length=1765576
Score = 125 bits (138), Expect = 2e-23
Identities = 126/164 (77%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585
||||||| |||||||| | | ||| | || ||||| | ||||| |||||||||||
Sbjct 99194 TTTTGGATGTTGTAATCTGAGAGAGTACGTCCGTCTTCCAATTGCTTTCCAGCGAAGATC 99135
Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645
| |||||||| ||||| ||||| || |||||||| |||||||| ||| ||| |||
Sbjct 99134 AAACGTTGTTGATCGGGAGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 99075
Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689
|||||||| |||| || || || | ||||| |||||||||||
Sbjct 99074 ATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGT 99031
>seq4
Length=2560074
Score = 100 bits (110), Expect = 7e-16
Identities = 171/248 (69%), Gaps = 0/248 (0%)
Strand=Plus/Plus
Query 193524 GCGTCTTTGTAGACGATGAAGGGCATGCCCACCTCCGCTTGAGCGACGAGAATGTGATGC 193583
|| || ||||| | ||||| || | || ||| | |||||| | |||||| | |
Sbjct 940913 GCATCCTTGTAAAGCATGAAAGGATTTCCGGTCTCGGTTTGAGCCTCAAGAATGGAGTAC 940972
Query 193584 CAAAGTTCTTGAGCTTTCACTGTCGTTCTGGCCTTTCCTTCCCTCTCGTACTTTTCGTAC 193643
||||||| |||||| || | ||| | | |||| ||| || | ||||| |||||
Sbjct 940973 CAAAGTTTTTGAGCCTTGATAGTCTTGCGACCCTTGCCTGCCTTTTCGTAACCCTCGTAG 941032
Query 193644 AGTTCCTCAAAATCTTGTCCGTAGATTTCGTCGAGACCGGGAGCTTCCTTTGGGCAAAAG 193703
|| |||| || || | || || | || | | ||| ||| ||| || ||||| | |
Sbjct 941033 AGAGCCTCGAACTCCTCGCCATAAACATCTGCTAAACCTGGACATTCGTTGGGGCACATG 941092
Query 193704 AGACTCCAATCTCCATCACTTTCCACCCTCTTCATGAAGAGGTCAGATGTCCAAATGGCG 193763
||| |||||||||||| |||| || | ||||||||| || |||| |||| | ||||
Sbjct 941093 AGAGTCCAATCTCCATTCTTTTCAACACGCTTCATGAATAGATCAGGAATCCACAAGGCG 941152
Query 193764 TAGAAAAG 193771
||||| ||
Sbjct 941153 TAGAAGAG 941160
>seq9
Length=1898748
Score = 95.1 bits (104), Expect = 3e-14
Identities = 84/105 (80%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529
||| ||||| |||||||||||||| ||||| || || |||||||||||||| ||||||||
Sbjct 1330661 GAAAATTTGTCCATCAGTAATAGAAATAACGTTAGTTGGGATATAAGCAGACACATCACC 1330720
Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACC 4574
|||| || || | || || | ||| || | |||||||||||
Sbjct 1330721 ACCTTGAGTCTCAATGACGGGGAGGGCAGTCAAGGATCCACCACC 1330765
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192525546656780
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |