Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq1 149 1e-30 seq15 138 3e-27 seq12 125 2e-23 seq4 100 7e-16 seq9 95.1 3e-14 >seq1 Length=3544467 Score = 149 bits (164), Expect = 1e-30 Identities = 157/207 (76%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||||||||| ||||| | ||| || || || ||||| |||| ||| ||||||| | || Sbjct 2378093 ACGAAGTCTGAGGACCAAGTGAAGGGTAGACTCTTTCTGGATATTATAATCGGAAAGGGT 2378152 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| || ||||| || ||||| || | || ||||||||||| ||||| || Sbjct 2378153 GCGACCATCTTCCAGTTGCTTTCCGGCGAAAATCAAACGCTGTTGGTCGGGAGGAATGCC 2378212 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||||||| ||||| ||| || |||||||||||||| | ||| || || | Sbjct 2378213 TTCCTTGTCTTGAATCTTAGACTTAACGTTGTCGATGGTGTCTGAAGATTCGACCTCAAG 2378272 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTT 225698 ||||| ||||| || || | ||| || Sbjct 2378273 GGTGATGGTCTTTCCGGTAAGAGTCTT 2378299 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| | || | ||| ||||| ||||| | |||||||| | | || | || || Sbjct 2377875 AGGACCAAATGTAAAGTCGATTCCTTTTGAATGTTGTAATCCGAAAGTGTACGACCGTCC 2377934 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || ||||| ||||| |||||||| |||||||| ||||| || ||||| ||||| ||| Sbjct 2377935 TCAAGTTGCTTACCAGCAAAGATAAGACGTTGTTGATCGGGTGGGATACCCTCCTTATCT 2377994 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||||||| |||||||| || || | ||| || || || ||||| ||| Sbjct 2377995 TGGATCTTCGACTTCACATTGTCGATGGTATCCGATGATTCAACCTCCAAAGTGATTGTC 2378054 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || | || || | ||| | ||||| Sbjct 2378055 TTTCCGGTAAGGGTCTTGACGAAAATCTGCAT 2378086 Score = 131 bits (144), Expect = 4e-25 Identities = 149/200 (75%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||||||||| ||||| | |||||||||||| || || |||| ||||| || ||| || Sbjct 2378375 ACGAAGTCTGAGGACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCACTCAAGGT 2378434 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| || || || || |||||||| | || ||||||||||| ||||| || Sbjct 2378435 GCGACCATCTTCAAGTTGTTTTCCGGCGAAGATCAAACGCTGTTGGTCGGGAGGAATTCC 2378494 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| |||||||| ||| || ||||||||||| || || || || | Sbjct 2378495 CTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGCTGGACTCAACCTCGAG 2378554 Query 225672 CGTGATCGTCTTGCCCGTCA 225691 || || ||||| || |||| Sbjct 2378555 GGTAATGGTCTTACCGGTCA 2378574 >seq15 Length=1659866 Score = 138 bits (152), Expect = 3e-27 Identities = 153/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 225510 GTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTG 225569 ||| ||||| || || ||||||| |||||||||| | || | |||||||| || || Sbjct 675669 GTGAAGAGTAGACTCCTTTTGGATGTTGTAATCGGAAAGGGTGCGACCATCTTCGAGTTG 675610 Query 225570 CTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTT 225629 ||| || |||||||| | ||| ||||||||||| ||||| || |||||||| |||||||| Sbjct 675609 CTTTCCGGCGAAGATCAATCGCTGTTGGTCGGGTGGAATTCCCTCCTTGTCCTGGATCTT 675550 Query 225630 TTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 ||| ||| ||||||||||| || | || || || | ||||| || |||||||| Sbjct 675549 GGACTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATGGTTTTGCCCGT 675490 Query 225690 CAAAGTTTTTATGAACACTTGCAT 225713 | || || | ||| | ||||| Sbjct 675489 GAGGGTCTTGACGAAGATCTGCAT 675466 >seq12 Length=1765576 Score = 125 bits (138), Expect = 2e-23 Identities = 126/164 (77%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585 ||||||| |||||||| | | ||| | || ||||| | ||||| ||||||||||| Sbjct 99194 TTTTGGATGTTGTAATCTGAGAGAGTACGTCCGTCTTCCAATTGCTTTCCAGCGAAGATC 99135 Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645 | |||||||| ||||| ||||| || |||||||| |||||||| ||| ||| ||| Sbjct 99134 AAACGTTGTTGATCGGGAGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 99075 Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 |||||||| |||| || || || | ||||| ||||||||||| Sbjct 99074 ATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGT 99031 >seq4 Length=2560074 Score = 100 bits (110), Expect = 7e-16 Identities = 171/248 (69%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 193524 GCGTCTTTGTAGACGATGAAGGGCATGCCCACCTCCGCTTGAGCGACGAGAATGTGATGC 193583 || || ||||| | ||||| || | || ||| | |||||| | |||||| | | Sbjct 940913 GCATCCTTGTAAAGCATGAAAGGATTTCCGGTCTCGGTTTGAGCCTCAAGAATGGAGTAC 940972 Query 193584 CAAAGTTCTTGAGCTTTCACTGTCGTTCTGGCCTTTCCTTCCCTCTCGTACTTTTCGTAC 193643 ||||||| |||||| || | ||| | | |||| ||| || | ||||| ||||| Sbjct 940973 CAAAGTTTTTGAGCCTTGATAGTCTTGCGACCCTTGCCTGCCTTTTCGTAACCCTCGTAG 941032 Query 193644 AGTTCCTCAAAATCTTGTCCGTAGATTTCGTCGAGACCGGGAGCTTCCTTTGGGCAAAAG 193703 || |||| || || | || || | || | | ||| ||| ||| || ||||| | | Sbjct 941033 AGAGCCTCGAACTCCTCGCCATAAACATCTGCTAAACCTGGACATTCGTTGGGGCACATG 941092 Query 193704 AGACTCCAATCTCCATCACTTTCCACCCTCTTCATGAAGAGGTCAGATGTCCAAATGGCG 193763 ||| |||||||||||| |||| || | ||||||||| || |||| |||| | |||| Sbjct 941093 AGAGTCCAATCTCCATTCTTTTCAACACGCTTCATGAATAGATCAGGAATCCACAAGGCG 941152 Query 193764 TAGAAAAG 193771 ||||| || Sbjct 941153 TAGAAGAG 941160 >seq9 Length=1898748 Score = 95.1 bits (104), Expect = 3e-14 Identities = 84/105 (80%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529 ||| ||||| |||||||||||||| ||||| || || |||||||||||||| |||||||| Sbjct 1330661 GAAAATTTGTCCATCAGTAATAGAAATAACGTTAGTTGGGATATAAGCAGACACATCACC 1330720 Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACC 4574 |||| || || | || || | ||| || | ||||||||||| Sbjct 1330721 ACCTTGAGTCTCAATGACGGGGAGGGCAGTCAAGGATCCACCACC 1330765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192525546656780