Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017-
05-31] 370 sequences; 44,096,448 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq7 136 3e-27
>seq7
Length=2023280
Score = 136 bits (150), Expect = 3e-27
Identities = 566/894 (63%), Gaps = 62/894 (7%)
Strand=Plus/Minus
Query 4257 TTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTT 4316
|||||||| || |||| ||||||||| || ||||| ||||| | || ||||||||
Sbjct 1768570 TTTTGGTAATCACCAACTCTCTTTTCGAAAAAGTTAGTCTTGCCGGCCAAGGAAATATTC 1768511
Query 4317 TCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAGAGCTACAAGC 4376
||||| || ||||| ||||| | | ||||| ||| || | ||| | ||
Sbjct 1768510 TCCATGAAGTCAAATGGATTGGCAGATTTGTAGACTTTGTCGTTGCCCAAAGCGATGAGG 1768451
Query 4377 AATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTA-A 4435
| || ||||| || ||||| || ||||| ||||||| | |||| || || | | |
Sbjct 1768450 AGACGATCAGCAACGAATTCGATGTACTGCTTCATGAGGGTGGAGTTCATGCCTAGAAGA 1768391
Query 4436 TCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTAT 4495
| || ||| || || | ||||| || ||||| || || | ||||| || ||||| |
Sbjct 1768390 GCACA-AGGAAGAGCCTCGGTCAAGAATTCTTGCTCGATTGCGACGGCCTCGGTGATGAC 1768332
Query 4496 ATCTTTTATTTTATCTTTAGATGGT---TTATTTACTAAGTATCCAAACAATAAACACGC 4552
|||| | | || ||||| | || | | | || | | || ||
Sbjct 1768331 GTCTTGGACAGCTTGCTTGGATGGGCGGTGCTTGAGATGGGAG---AAGAGGAGGCATGC 1768275
Query 4553 AAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGG 4612
||||| || | ||||||||| | | || |||||||| ||||| || | |||||
Sbjct 1768274 GAAATCGGTGTGGAGACCTTCGTCACGGGAGATGAGTTCGTTTGAAAAGGTGAGTCCGGC 1768215
Query 4613 CATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCC 4672
||| | ||| | ||| || ||||| || |||| ||| || || || || || || || ||
Sbjct 1768214 CATGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGATCCGGAGAAAAAGATACC 1768155
Query 4673 TTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTTAATCCA 4732
||| ||||| || || || || | || | || | | | || |||| ||||||
Sbjct 1768154 TTCAACGGCAGCGAATGCGACAAGACGTTGAGCAAAGGTGGAGTTCTTATCTTGAATCCA 1768095
Query 4733 TTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAA---------TTGT-----GTAT 4778
||| | ||||||| || || ||||| | ||| |||| |||| | ||
Sbjct 1768094 TTTGACAGCCCAGTCGGCCTTCTTCTTGATGCAAGGAACTATCAAGCTTGTTAGTTGAAT 1768035
Query 4779 A----TAGCGTTAAATAATT------TACTTTTTTCAAATG---------GGT------- 4812
|| | || || ||| |||| | |||| | |||
Sbjct 1768034 TCACGTAACAATATATGATTATCACCTACTGGTATCAATAGCATTGAAGAGGTATGTCTT 1767975
Query 4813 -----CTTGA------ATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATT 4861
|||| ||||| ||||| || || || || |||| || || || ||
Sbjct 1767974 TTGTGCTTGCTCCTTGATATATGTGTCGATGAGAAGAGAGTATGTTTCGGAGTGAATGTT 1767915
Query 4862 TTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACA 4921
|| || || || || ||||| ||||||| || |||| | ||||||||| ||
Sbjct 1767914 CTCCATCATGATTTGGAAACCGTAGAAGCATCGTGCCTCTGGGATTTGAACTTCACCACT 1767855
Query 4922 AAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAAC 4981
|||| || || ||||| ||||| || || ||||| || || || || || | |||
Sbjct 1767854 GAATCGCTCAACCAAGTTCTCGTTGACAATTCCGTCTGATGCGGCGAAGAATGCGAGAAC 1767795
Query 4982 ATGAGATATAAAGTACTGTTCGTCAGGCTTAAGT---TTTTTCCAGTGGGGCAAATCTTT 5038
|| || || ||||| | |||||| || ||| || ||||||| | | | ||| ||
Sbjct 1767794 GTGGGAGATGAAGTAACGCTCGTCATCATTGAGTCTGTTGTTCCAGTCGTGGAGATCCTT 1767735
Query 5039 AGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACAT 5092
| ||||||| ||||| | ||||| || || || || || |||||||||||
Sbjct 1767734 TGACAAATCAATCTCTTCTGCGGTCCAGAAAGATGCCTCTGCCTTTTTGTACAT 1767681
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427047674273210
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |