Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq7 136 3e-27 >seq7 Length=2023280 Score = 136 bits (150), Expect = 3e-27 Identities = 566/894 (63%), Gaps = 62/894 (7%) Strand=Plus/Minus Query 4257 TTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTT 4316 |||||||| || |||| ||||||||| || ||||| ||||| | || |||||||| Sbjct 1768570 TTTTGGTAATCACCAACTCTCTTTTCGAAAAAGTTAGTCTTGCCGGCCAAGGAAATATTC 1768511 Query 4317 TCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAGAGCTACAAGC 4376 ||||| || ||||| ||||| | | ||||| ||| || | ||| | || Sbjct 1768510 TCCATGAAGTCAAATGGATTGGCAGATTTGTAGACTTTGTCGTTGCCCAAAGCGATGAGG 1768451 Query 4377 AATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTA-A 4435 | || ||||| || ||||| || ||||| ||||||| | |||| || || | | | Sbjct 1768450 AGACGATCAGCAACGAATTCGATGTACTGCTTCATGAGGGTGGAGTTCATGCCTAGAAGA 1768391 Query 4436 TCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTAT 4495 | || ||| || || | ||||| || ||||| || || | ||||| || ||||| | Sbjct 1768390 GCACA-AGGAAGAGCCTCGGTCAAGAATTCTTGCTCGATTGCGACGGCCTCGGTGATGAC 1768332 Query 4496 ATCTTTTATTTTATCTTTAGATGGT---TTATTTACTAAGTATCCAAACAATAAACACGC 4552 |||| | | || ||||| | || | | | || | | || || Sbjct 1768331 GTCTTGGACAGCTTGCTTGGATGGGCGGTGCTTGAGATGGGAG---AAGAGGAGGCATGC 1768275 Query 4553 AAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGG 4612 ||||| || | ||||||||| | | || |||||||| ||||| || | ||||| Sbjct 1768274 GAAATCGGTGTGGAGACCTTCGTCACGGGAGATGAGTTCGTTTGAAAAGGTGAGTCCGGC 1768215 Query 4613 CATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCC 4672 ||| | ||| | ||| || ||||| || |||| ||| || || || || || || || || Sbjct 1768214 CATGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGATCCGGAGAAAAAGATACC 1768155 Query 4673 TTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTTAATCCA 4732 ||| ||||| || || || || | || | || | | | || |||| |||||| Sbjct 1768154 TTCAACGGCAGCGAATGCGACAAGACGTTGAGCAAAGGTGGAGTTCTTATCTTGAATCCA 1768095 Query 4733 TTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAA---------TTGT-----GTAT 4778 ||| | ||||||| || || ||||| | ||| |||| |||| | || Sbjct 1768094 TTTGACAGCCCAGTCGGCCTTCTTCTTGATGCAAGGAACTATCAAGCTTGTTAGTTGAAT 1768035 Query 4779 A----TAGCGTTAAATAATT------TACTTTTTTCAAATG---------GGT------- 4812 || | || || ||| |||| | |||| | ||| Sbjct 1768034 TCACGTAACAATATATGATTATCACCTACTGGTATCAATAGCATTGAAGAGGTATGTCTT 1767975 Query 4813 -----CTTGA------ATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATT 4861 |||| ||||| ||||| || || || || |||| || || || || Sbjct 1767974 TTGTGCTTGCTCCTTGATATATGTGTCGATGAGAAGAGAGTATGTTTCGGAGTGAATGTT 1767915 Query 4862 TTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACA 4921 || || || || || ||||| ||||||| || |||| | ||||||||| || Sbjct 1767914 CTCCATCATGATTTGGAAACCGTAGAAGCATCGTGCCTCTGGGATTTGAACTTCACCACT 1767855 Query 4922 AAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAAC 4981 |||| || || ||||| ||||| || || ||||| || || || || || | ||| Sbjct 1767854 GAATCGCTCAACCAAGTTCTCGTTGACAATTCCGTCTGATGCGGCGAAGAATGCGAGAAC 1767795 Query 4982 ATGAGATATAAAGTACTGTTCGTCAGGCTTAAGT---TTTTTCCAGTGGGGCAAATCTTT 5038 || || || ||||| | |||||| || ||| || ||||||| | | | ||| || Sbjct 1767794 GTGGGAGATGAAGTAACGCTCGTCATCATTGAGTCTGTTGTTCCAGTCGTGGAGATCCTT 1767735 Query 5039 AGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACAT 5092 | ||||||| ||||| | ||||| || || || || || ||||||||||| Sbjct 1767734 TGACAAATCAATCTCTTCTGCGGTCCAGAAAGATGCCTCTGCCTTTTTGTACAT 1767681 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427047674273210