Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq4 333 4e-86 seq7 113 6e-20 >seq4 Length=2560074 Score = 333 bits (368), Expect = 4e-86 Identities = 1313/2040 (64%), Gaps = 59/2040 (3%) Strand=Plus/Plus Query 76812 GTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTT 76871 ||||||| ||||||||| || || || | ||||| |||| || ||||||||| | Sbjct 939917 GTACGTAAATAGTACATTCCGGTCTTCAAACCCAATTTCCAACCAGCAAAATGCATGGAT 939976 Query 76872 GTCAGTTTGGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATG 76931 || | ||| ||||||| || ||||| ||||| || ||| |||||||||| Sbjct 939977 GTAATCTTGCCCATTGTAGGATCCTTCATGTGAATGTTCATTGATTGAGATTGATCGATG 940036 Query 76932 AAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTT 76991 || || || | |||||| ||||||| | ||| || ||||| |||||||||| ||| Sbjct 940037 AATGCACCACGATCAGCAGCCATTTGAACAATTGTTCGTTGAGAGATTTCCCAAACAGTC 940096 Query 76992 TTGAAAACTTGTTTGATATCATCTGGAAGGTTTG---TATTTTGAATGGAACCACCATCT 77048 ||| ||| ||||| ||| |||||| || | ||||||||||||| |||||||| Sbjct 940097 TTGTAAAGAGCCTTGATGTCAGCTGGAATATTGGGGATATTTTGAATGGATCCACCATCA 940156 Query 77049 GATATAATTGTATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGG 77108 | || || ||||| |||| ||| ||| | | | || | | | || Sbjct 940157 GCAATGATACGGTTCTTCATATTGTCAGACCAGAGACCCATATCGACAAGGTCCTTGAGA 940216 Query 77109 AGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTG 77168 || || ||||| | ||| |||||||| | | || | ||||| ||| || || Sbjct 940217 AGCCATGGGTTAACGACTTGGAATTCTCCGGCAAGAACACGACGAGAGTAGATGTTTGAA 940276 Query 77169 GTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATA 77228 || || || || | | |||| ||| || | |||||| | || |||||| |||||| Sbjct 940277 GTGTAAGGCTCGAAACATTCGTTGAAGCCAAGAATTTGGGATGTGCTAGCAGTAGGCATA 940336 Query 77229 GGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTC 77288 ||||| || | | | || | || || ||| |||| | || | | | | | Sbjct 940337 GGTGCAACTAGGAGAGAGTTGCGGATTCCGTGTTGCTTGATGGATTGCTTCAAAGAGTCC 940396 Query 77289 CAATCCCAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTA 77348 |||||||| | ||| | |||| ||| |||| | ||||||||| || || ||| Sbjct 940397 CAATCCCACAAATCAGTAGGTGTAACCCCCCACATATCGTATTGAAGTTCACCCTTAGAG 940456 Query 77349 GCATATGATCCATTATATGTTTCATAAGGTCC---TTCTGTTTC-AGCTAGTTCACAACT 77404 | || || | ||| ||||| || || || ||| || | | || | | || Sbjct 940457 ACTGGGGAGCCTTGATAGGTTTCGTATGGGCCAAGTTCCTTTGCGATCTCGA-CGGAAGA 940515 Query 77405 CGCTTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTC 77464 | ||| || ||| || || || |||||||| | | ||||| | || ||||| Sbjct 940516 GGT---CAAGGCAGCGTGGTAGATGGTCTCGAAAATTTGTATGTTGAGGTGTTTGGCTTC 940572 Query 77465 AATACTATCAAACGGATAATGTAAAAG--AATAAAGGCATCTGCTAATCCCTGAACTCCA 77522 ||||| ||| | | || || || |||| |||| || | || ||||| || Sbjct 940573 TGGGGAGTCAAATGGAAGACG-AAGAGCCAAGAAAG-CATCAGCAAGACCTTGAACACCG 940630 Query 77523 ATACCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTA 77582 | | ||||||| ||| | |||| || || |||| | ||||| || || Sbjct 940631 ACCGCGATAGGTCGATGACGGAAATTGCTTTTTCGGGCCTCTGCGACTGGATAGTAGTTG 940690 Query 77583 ATGTCTATAATTTTATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGA 77642 ||||| ||||| ||||| | ||||||||||| |||| || || || | || || | Sbjct 940691 ATGTCAATAATCTTATTCAAGTTTCTAACAACAACTTGGACAACCTCGTGAAGCTTTTGG 940750 Query 77643 AAATCAAATCTTCCATCTATAAC-------AAACATGTTCAAAGCTATAGATGCTAGATT 77695 |||||| | |||| || | | ||| || | ||||| || || || | || Sbjct 940751 AAATCATAAGTTCCCTCATTCATGTTGACGAAAGTTGGT-AAAGCGATGGAAGCCAAGTT 940809 Query 77696 ACAAACTGCTACCTCATTAGCGTTGGCA---TATTGTATTATCTCGGTACATAGATTACT 77752 ||| || ||||||| | || ||| || | | || || || || | ||| Sbjct 940810 ACAGCAAGCAACCTCATCTG-GT--GCAGAGTACTCGACGATTTCCGTGCACAAATTGGA 940866 Query 77753 ACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAG 77812 | ||||| ||||| || | |||||||||||| || ||||||| ||||| ||||| Sbjct 940867 GCTGCGAATAGTACCCAGGTTCTTTTGGTTGCTCTTCTTGTTGCATGCATCCTTGTAAAG 940926 Query 77813 AATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGC 77872 || || ||| | ||||| || | || | || | ||| || | ||| | | ||| Sbjct 940927 CATGAAAGGATTTCCGGTCTCGGTTTGAGCCTCAAGAATGGAGTACCAAAGTTTTTGAGC 940986 Query 77873 TTTTATCATAGATTTGTATC----GCCTCTCTCTTTCATATTGA--GTATATAGCCGTTC 77926 || || || ||| | |||| || |||| || ||| | |||| || Sbjct 940987 CTTGAT---AGTCTTGCGACCCTTGCCTGCCT-TTTCGTAACCCTCGTAGAGAGCC--TC 941040 Query 77927 AAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCA 77986 || || || || ||||||| | || || || ||||| || |||||||| | | ||| Sbjct 941041 GAACTCCTCGCCATAAACATCTGCTAAACCTGGACATTCGTTGGGGCACATGAGAGTCCA 941100 Query 77987 GTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAG 78046 || |||| | | ||| || ||||| || |||||||| ||||| | || || || Sbjct 941101 ATCTCCATTCTTTTCAACACGCTTCATGAATAGATCAGGAATCCACAAGGCGTAGAAGAG 941160 Query 78047 ATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAAT 78106 ||| || | | | |||||| || || ||| || ||||| || ||||| | || Sbjct 941161 ATCGCGTGCACGAACTTCTTCCTTGCCATGATTTTTGCGTAGATCAAGGAACTCAAAAAC 941220 Query 78107 ATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTG 78166 ||| | ||||||||| || || || | || | | ||||| || |||||||| || || Sbjct 941221 ATCCGCATGCCATGGCTCAAGGTAAACAGCAAAGGCACCAGGACGCTTATTACCACCTTG 941280 Query 78167 ATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGT 78226 ||| | ||||||||| ||||| || |||||| | ||| |||| || |||||||| | Sbjct 941281 ATCAACATATCTGGCAGTGTTGTTGAAAACTCGGAGCATAGGAACGATGCCGTTAGAGTT 941340 Query 78227 TCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATA---TTACTAATGGATATCCC 78283 |||||| || || | || || ||| | || || || | | || || | || Sbjct 941341 TCCATTGGTACCGGCTATGTATGCGCCAGTAGCACGGATTCGGTGAATATTG---AGACC 941397 Query 78284 TATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTC 78343 || || || || |||| || || | ||| ||| ||||| |||||||| ||||| || Sbjct 941398 AATACCACCAGCATTCTTTGAGATCATAGCACAAATCTTCAAAGTATCGTAAATACCATC 941457 Query 78344 TATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCC 78403 |||||||| ||| |||||| | ||| || || || | ||| || ||| || Sbjct 941458 AATACTGTCCTCCTTCATGTCGATAAGGAAGCATGATGAAAGTTGTGCTTGTGGAGTACC 941517 Query 78404 TGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGT 78463 ||| || | ||| || || ||||| || || | || | || | | |||||||| Sbjct 941518 CGCAGAGAAGAGTGTTGGCGAGGCATGTGTGAAGTACTTGTTTGACATCAAGTTGTATGT 941577 Query 78464 TTCAATAGCTGATTCTATGTC-CCATTGATGAATTCCTACCGCTACACGCATCAACATAT 78522 ||| || || ||| ||||| || | ||||| || || || |||||||| | ||| | Sbjct 941578 TTCGATGGCACTTTCAATGTCATCACCG-TGAATACCAACGGCAACACGCATGATCATTT 941636 Query 78523 GCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTT 78582 | || || | ||| | || || | | | ||||||| || | ||| | Sbjct 941637 GTTGTGGACGTTCTGCAACTTTGCCATCAAGACGTAGAAGGTATGATCGCTCGAGAGTCT 941696 Query 78583 TAAAACCAAAATAGTTGTA--TGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTT 78640 | || ||||| || | || ||||| |||| ||||| | ||| ||||||| |||| Sbjct 941697 TGAATCCAAAGTATTGATAGTTGAAA--TCTCGGTCGTAGACAATGGCAGAATTAAGTTC 941754 Query 78641 ATCTTTGTATTTGGTAACAATATCCATGACAG--TAGTTG-AAATAATAGGAGATCGTAC 78697 || | | | | ||||| || || || | ||| ||| ||||||||| | Sbjct 941755 CTCCTCATGTCTCATAACACATTC---GAAAGTTTCCTTGCTAATCATAGGAGATGCTGT 941811 Query 78698 ACCATTTTTAGGATTAACATAGTTAAATAAATCTTCCATTACATCACTAAATAGtttttt 78757 |||||| | || || ||| | ||||||| || || | || ||||||| Sbjct 941812 GCCATTTCTTGGGTTTGTATATTGGTATAAATCGCGAATAACGTGCGAGAACTGTTTTTT 941871 Query 78758 tGTTTCCTTGTGTAGATTAGATACAGCTATTCTTGCAGCTAGAATAGCATAATCAGGATG 78817 |||| ||||| || || || || || || | ||||||||||| |||||||| ||||| Sbjct 941872 GGTTTGTTTGTGAAGGTTGGAGACTGCAATACGAGCAGCTAGAATGGCATAATCGGGATG 941931 >seq7 Length=2023280 Score = 113 bits (124), Expect = 6e-20 Identities = 228/334 (68%), Gaps = 7/334 (2%) Strand=Plus/Minus Query 48363 GTTTCTATAGCATTAAAGAGAAA-Gtttttt-tCATTGCTATCTTTAACGTAAGTATCTA 48420 || || |||||||| ||||| | || |||| | ||||| | || | || || || | Sbjct 1768003 GTATCAATAGCATTGAAGAGGTATGTCTTTTGTGCTTGCT--CCTTGATATATGTGTCGA 1767946 Query 48421 TTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAAC 48480 | | |||| || ||||||||||||| || || || || || || ||||| || | Sbjct 1767945 TGAGAAGAGAGTATGTTTCGGAGTGAATGTTCTCCATCATGATTTGGAAACCGTAGAAGC 1767886 Query 48481 ATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTA 48540 ||| || |||| ||| || || || || ||||| ||| |||| ||||| || || | Sbjct 1767885 ATCGTGCCTCTGGGATTTGAACTTCACCACTGAATCGCTCAACCAAGTTCTCGTTGACAA 1767826 Query 48541 TTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAG 48600 |||| || || || || ||||| | || || || || || |||| | Sbjct 1767825 TTCCGTCTGATGCGGCGAAGAATGCGAGAACGTGGGAGATGAAGTAACGCTCGTCATCAT 1767766 Query 48601 TCAGT---TTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAA 48657 | ||| || |||||||| | || ||| ||||| | ||| | ||||| || ||||| | Sbjct 1767765 TGAGTCTGTTGTTCCAGTCGTGGAGATCCTTTGACAAATCAATCTCTTCTGCGGTCCAGA 1767706 Query 48658 ATGATGCCTCTGCTTTTTTATACATATTCCATAT 48691 | ||||||||||| ||||| ||||| | ||| || Sbjct 1767705 AAGATGCCTCTGCCTTTTTGTACATCTGCCAGAT 1767672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694665587156800